Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01053 ATGGCTGTAGAACTCATGGGTTTTCCGAAAATGGATGAGCAGATGGCCATACAAGAGGCTGCTTCTCAAGGCATCAAAAGCATGGAGCACCTCATTCGCCTTATGTCTCATCAACCTTCTCCTTCCGATTGCGCCAACCTCACCGACGTTACCGTTTCCAAGTTCAAAAAGGTCATTTCCCTTTTAAACCGGTCGGGTCATGCCCGGTTCAGACGGGGACCCGTCAACTCCTCAACATCGTCTACTTCGTTGACCTTATATCCTCCTGCATCAGCTTCTCCTTCAAGCTCTGCTTTCCTACCTGCTGTCCATCGCCCAAAAGTGCAGCAGGAAAACCAACAGCGAACTGCTCCTGTAACAGCGGGTTTTACTCCGGCATCGTTTGCTTCTCCACCGAAGATCATAACTTCGGTACCTGTACATCATGCAGCGATTTCGGCTCCTCCAAGTTTCGTCTCGCCTCAACCTCAAAGTGTGATCGATTTTACTAGACCTAACATCTTGACCTCCAATGGAAAATCAACAGAGCTAGAGTTCGTCCCGAAAGATAACTTCAGCGTTTCATCCAATTCATCGTTCCTCTCTTCTGCCATCACCGGAGATGGTAGCGTCACCAATGGGAAGCAAGGATCGTCGCTCTTTCTGGCCCCACCTGTGAACGGGAAACCGCCGTTATTGTCGTCTCCATTGAAGAAACGATGCCATGACCATCACGAACACTCGGACGATATCTCTGCGAAGATCTCTGGCTCCGGAAAATGCCACTGTATGAAAAAAAGGAAAGATCGGATAAAGAAAACGATTAGAGTGCCGGCGATCAGTACAAAAGTAGCCGATATCCCAGCTGACGAGTACTCGTGGAGGAAGTACGGTCAAAAGCCGATAAAGGGGTCGCCATACCCACGGGGGTATTACAGATGCAGTACAGCTAGAAGGTGTCCGGCGAGGAAACACGTGGAACGTGACAAAGAAGATCCAACGATGTTGATTGTGACTTACGAGGGGGAGCACCTCCATTCTGCTCAATCAGCGATGCAGGAGAATATGGTCGCTAATGGGTTCGGCGTTTGA 1071 0.4958 MAVELMGFPKMDEQMAIQEAASQGIKSMEHLIRLMSHQPSPSDCANLTDVTVSKFKKVISLLNRSGHARFRRGPVNSSTSSTSLTLYPPASASPSSSAFLPAVHRPKVQQENQQRTAPVTAGFTPASFASPPKIITSVPVHHAAISAPPSFVSPQPQSVIDFTRPNILTSNGKSTELEFVPKDNFSVSSNSSFLSSAITGDGSVTNGKQGSSLFLAPPVNGKPPLLSSPLKKRCHDHHEHSDDISAKISGSGKCHCMKKRKDRIKKTIRVPAISTKVADIPADEYSWRKYGQKPIKGSPYPRGYYRCSTARRCPARKHVERDKEDPTMLIVTYEGEHLHSAQSAMQENMVANGFGV* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01053 356 Pfam WRKY DNA -binding domain 283 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte8g01053 356 SUPERFAMILY WRKY DNA-binding domain 278 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte8g01053 356 Pfam Plant zinc cluster domain 231 279 IPR018872 -
Pte8g01053 356 SMART WRKY_cls 281 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte8g01053 356 Gene3D WRKY domain 267 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte8g01053 356 FunFam WRKY transcription factor 65 265 342 - -
Pte8g01053 356 ProSiteProfiles WRKY domain profile. 276 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte8g01053 356 MobiDBLite consensus disorder prediction 229 245 - -
Pte8g01053 356 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 344 IPR044810 GO:0003700
Pte8g01053 356 MobiDBLite consensus disorder prediction 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01053 Pte-Chr8 34745165 34747528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01053 1 349 WRKY Transcription Factor Family AT2G24570 55.278 8.50e-110 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte8g01053 WRKY 6.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01053 - - qsa:O6P43_019342 440.654