Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte8g01046 | ATGCTTCCTCTCGAGGTTGGTACTCGCGTTATGTGCCGTTGGAGGGACGGGAAGTTCCATCCCGTCAAGGTTATCGAGCGGAGGAAAGTGCAGGCTGAAGGGTCTAGCGGTTATGAGTACTACGTCCATTACACTGAGTTCAACCGTAGGCTCGATGAATGGGCGAAGCTTGACCAACTTGATCTTGATTCAGTAGAAGCTGTGGTTGACGAGAAGGTGGAGGATAAGGTTACTAGCTTGAAGATGACCCGTCATCAGAAAAGGAAGATTGATGAGACGCATGTTGAGGGTCACGAAGAACTCGATGCTGCCAGTTTGCGTGAACATGAAGAATTCACTAAAGTGAAAAATATAGCTACCATTGAACTCGGAAGATACGAGATTGAGACATGGTACTTCTCGCCCTTCCCACCAGAATATAATGACTGTGTAAAGCTGTACTTCTGTGAATTTTGCCTCAATTTCATGAAGCGCAAAGAGCAGCTTCAGAGGCATATGAGAAAGTGTGACCTGAAGCACCCGCCCGGTGATGAAATATATAGGAGTGGTACTCTCTCTATGTTTGAGGTTGATGGTAAAAAGAACAAGGTTTACGGGCAGAATTTATGTTATTTGGCAAAATTGTTTCTCGATCACAAGACCCTCTATTATGATGTGGACCTATTTCTTTTCTATGTTCTATGCGAGTGTGATGACCGAGGATGCCATATGGTTGGGTATTTCTCTAAGGAAAAGCATTCAGAGGAATCATATAATTTGGCGTGTATTCTCACCCTTCCTCCTTACCAGAGAAAAGGCTATGGGAAGTTTTTGATTGCTTTCTCTTATGAGCTATCAAAGAAAGAATGCAAAGTTGGCACACCTGAGAGACCGCTTTCAGACCTTGGGTTATTGAGCTACAGAGGATATTGGACCCGGGTTCTCCTAGACATATTGAAAAAACATAAGGGTAACATTTCTATTAAGGAGCTTAGTGATATGACAGCAATTAAAGCAGAAGATATACTGACTACCCTGCAGAGCCTGGAACTGATCCAGTACAGAAAGGGTCAGCATGTCATTTGCGCAGATCCTAAGGTTTTGGACCGTCATCTGAAAGCTGCTGGTCCTGGGGGTCTTGATGTTGATGCCAGCAAATTGATCTGGACTCCTTACAAAGAACAAGGTTGA | 1170 | 0.4402 | MLPLEVGTRVMCRWRDGKFHPVKVIERRKVQAEGSSGYEYYVHYTEFNRRLDEWAKLDQLDLDSVEAVVDEKVEDKVTSLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCVKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKECKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGPGGLDVDASKLIWTPYKEQG* | 390 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte8g01046 | 389 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 114 | 385 | IPR016181 | - | |
| Pte8g01046 | 389 | Pfam | RNA binding activity-knot of a chromodomain | 4 | 62 | IPR025995 | - | |
| Pte8g01046 | 389 | PANTHER | HISTONE ACETYLTRANSFERASE | 12 | 385 | - | - | |
| Pte8g01046 | 389 | FunFam | Histone acetyltransferase | 112 | 169 | - | - | |
| Pte8g01046 | 389 | FunFam | Histone acetyltransferase | 172 | 300 | - | - | |
| Pte8g01046 | 389 | SUPERFAMILY | Chromo domain-like | 3 | 114 | IPR016197 | - | |
| Pte8g01046 | 389 | ProSiteProfiles | MYST-type histone acetyltransferase (HAT) domain profile. | 113 | 384 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
| Pte8g01046 | 389 | Gene3D | - | 172 | 384 | - | - | |
| Pte8g01046 | 389 | FunFam | Histone acetyltransferase | 292 | 370 | - | - | |
| Pte8g01046 | 389 | FunFam | Histone acetyltransferase | 1 | 113 | - | - | |
| Pte8g01046 | 389 | Pfam | MOZ/SAS family | 174 | 351 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
| Pte8g01046 | 389 | Gene3D | - | 114 | 170 | - | - | |
| Pte8g01046 | 389 | Gene3D | - | 1 | 113 | - | - | |
| Pte8g01046 | 389 | Pfam | MYST family zinc finger domain | 115 | 169 | IPR040706 | - | |
| Pte8g01046 | 389 | CDD | CBD_MOF_like | 7 | 76 | - | - | |
| Pte8g01046 | 389 | Gene3D | - | 292 | 372 | IPR036388 | - | |
| Pte8g01046 | 389 | SMART | chromo_7 | 18 | 77 | IPR000953 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte8g01046 | Pte-Chr8 | 34683992 | 34688551 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pte8g01046 | 1 | 390 | C2H2 Transcription Factor Family | AT5G64610 | 92.308 | 0.0 | 756 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte8g01046 | K11308 | - | qsa:O6P43_015237 | 773.852 |