Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01045 ATGCGCTGGTGGTGGTGCACGGTGTTGTTGTCGGTGGTGACCGAAGGCCAATTTCACGGCCGGGAAAAGATGATGGGTCAGGGCGGGGCAGGTGGTTGTGGCACCGAGGAGAGACCATGCCCGGCTTCTAGGTTGGAGTTGGAGTTGGAAGCGAAAGAGGACACGGGTTCGCCACTGATTGATTTTTATTCTCAGGCGAGGAAAGCACTTTGCGAGCGTTCGCCTTTTGATGTGGCGGAGGAGTCTACTTCTGGTTCGGTAATTGTAACTACTTTGAAAAGTGGTTTGCCCAGCTCACTGAATAGGCACTCTGAGAGTAGGAGACGTTACAGGAAGTCTCATTCAGGGGCCGACAAGAAATCTTCTAGAGCAGGGGATAGGTCGCAGAGTAATAGTATTTGGGTGGAGATGGAGGAGTGCTTCAGGAACTTGTCACTGCCCGATATTGACTGTATATTGCAGCTATCTTCTTTTAGTGATTTAGCAAATAGAAAGTGTTTTTCCATCCCCAAATTGGAACATCAGCCCAGCTCTTCAGATGCAGGCGGGGTTGTTAGTGGCAGGGAGATTACCAGAAATGAGAATGCTGGACATGTGAAAAATGAGGATAGTTCCATGGTAGTCGATAATACTGAGGGTGATGTCTCGCCTTCTGAGGACAAAGAATGTTCGACATCTCATTGCTCTGATAGTTTAGGATGGCTATTAGGTTGTAGGAATAAGATATATTTGTCTTGTGAGCGCCCTTCTAAGAAAAGGAAGCTTTTGGGTGGTGATGCAGGGCTAGACAAAGTTTTAATTGCTCGTCCTTGTGAAGGCGTTTCATCTTTATGCCATTATTGTAGTACCGGGGAATCTGGTAATAAGTCAAGTGGTTTAATTGTGTGTAGTTATTGTAAGGTAGCAGTTCATAGAAAGTGCTACGGTGTCCAAGATGGAGTGGATGGACCCTGGTTATGTGCCTGGTGTGAGCAAAACAGTGGTGTTGGTCTTGTTGGTGATGTAGCGAATACTTGTGTGCTTTGTCCTAAGAAGGGTGGTGCTCTTAAGCCTGCATACAGAAATGTCGAGGATGGTGGTTCAGTTGAATATGCACATTTGTTTTGCTGTTTGTGGATGCCTGAGGTCTATATAGAGGACCTTTCTAGAATGGAGCCTATTATGAAAATAAGTGGAATTAAGGAAGCACGCAGAAAATTGATCTGTAACGTATGCAAGATGAAGTCCGGTGCTTGTGTTCGGTGCAGCAATGGGGCGTGTAGGACTTCCTTTCATCCAATATGTGCAAGAGAGGCAAAGCATAAAATGGAAATTTGGGCAAAACATGGGAATGATGATGTTGAGTTGAGAGCATTTTGCTCAAAGCATTCAGAAACACGAGATAATGTTGTTCTTTGGTCTGACAATTCTTTACCATTTGGTGATCCTGATTTTTCTGCTGTAAACAATTGCCCAGTTACATTCCCCTTGCCACACAAGTCAAAACTTGATCATGATAATGGTGATATGGGAGGCTCTATGGAAGCTTCCTATAAATTTGGTAACAGTGATAATGAGTCGCAGGAGACAACATCGTCTGCATCTAAATCAGGTGCTACTGTTTTGATAGAAGGTGATGATAGACAGCATATCAATGACGCTGGGGGACTGATTGCGAAAAGTGATGAAGATGTTTATCCTTCTGACTCTGTTCATTTTACTGTTGTTTTGAAGAAGTTGATTGACCTTGGAAAAGTTGATATCGAGGATGTAGCTCCAGACATTGGCATTTCACCGGAGTTATTGATTGCAAATCTTTCTGATGATTCTATGTCCCCTGAAGTGAGATTCAAAATTGCAACTTGGCTCAGAAGTCACGCATATATGAATACATTTCAGAAAAACTTGAGGTTCAGAGTGAAACCAGTCAATTCGCGCAAGGATGAAATTGGAGATTATGGTTATGATAGTTTAGCTGTATCAGGACCTGGCATCGTTGATCCTGTTGCTGTTAAGTCTGTACCACCAAGGAGGCGGACTATAAATAATATAAGGCTTTTGAAGGATAACAGCCTAAAGTCCTCAGGAGTTGCAATTTCTACAGATGTGTCACATATGGAAGATTGTGAAGCTGATCAGCCTCTCATATCTTCTCCTGACACTGTGTCTATGAGGCCTGAGATCTCTCAAGCTCCTCTTGAAAACAACAGTTTGGATAAACCCTGCAATACCAGTATGTCTGAAAGGGTTGTAGGAAAGGAAACCGTTACATATATGCAGAATTCTGTTGGTGGTGGTGATGCAGATCCATGCTGTCTGGATACTACAGCTGCAAAAACAGCTGACTCTGCTTTCATAAGTACAGAATTGGTCAGTAGTTACATTCATCCTTATGTCAGGGGAAAGTTGATGCAAATTCAGAAGGGGTTCCCACTAGAAGGCATAAGACATTCATGGAAAGATGATCCCACTCCTGTGGATGCTGTCTGCTGTGATAACCATGATCATCATTCAGACAATCATGGAGCAGTTACTTCCCTGGATCAATCTAATGCAGAAAAATTGGTTTTAGCTAGGAAAATGAGATTGCTGGAGTCTTGTCCAGAAGATGAAGTTGAAGGGGAGATTGTTTACTTCCAGCACAGATTACTATTAATATTAGCGGCAAGGAAACAATGCACTGATAATCTTATATGCAACGTGGTGAAGAGTCTTCCAGCAGAGATTGATGCAACACGGCAACAACAATGGGATGCTGTGCTTGTGAATCACTTTCTTAGTGACCTTAAGGAAGCTAAGAAACAAGGTAGAAAAGAAAGAAGGCACAAAGAAGCTCAGGCAGTGCTAGCTGCTGCAACTGCTGCTGCTGCTTCTTCTTCCAGGGTTTCTTCATTTAGGAAGGACGCTTTAGATGAATCTACAACTCATGAGAATATGTTCAAACTAGATGCTTCAGCTGGAAGGTCTGGCATTACTTCTCAGTTGTTGCCGAAAGCAAGAGAGACACTTTCAAGGGTAGCTGTTACATGTAACTCTACTGAAAAGCATTCTGGACTTGGTTTGACAGAGTTAGATCATCCAAGAGAACACCCTAGATCATGTGACATTTGCAGACGGTCTGAAACAATAAGCCCTATCTTCACTTGTTCCAGTTGCAAGGTTGCTGTTCACTTGGATTGCTATCGAAGTGTGAAAGAATCAATGGGTCCATGGTACTGTGAGTTATGCGGAAGTGTTGCTTACAGAACCTCTGGAGTTCCAGCTGTCAATTTTCGGGATAAACCTCCCTTTATTGTGAAATGCAGTTTGTGCGGTGGTGCTACTGGTGCTTTCAGGAAAACCTCTGATGGTCAGTGGGTCCATGCCTTCTGTGCAGAGTGGGTATTTGAGACAACATTCAGAAGGGGACAACTTCATCCTGTTGAAGGAATGGAAACATTATTGAGGGGAACTGGTGCATGTTGTATCTGCCGTCGTAATTATGGTGTCTGCATTAAGTGTGACTATGGGCACTGCTTGACTATATTTCATCCATCCTGTGCGAGATGCACTGGTTTGTACATGAGTGTGAGAACAGTGAATGGAAACCTTCAACATAAGGCTTACTGTGAGAGGCATAGTTTGGAGCAAAGGGCAAAGGCTGAAACTCAAAAGCATGGGACTGAGGAGTTGAAGAACATCAAGCAAATTAGGGTTGAGCTGGAGAGATTACGTCTACTTTGTGAGAGAATCGTTAAACGCGAAAAAATAAAGCGGGAACTAGTGCTTTGCTCACATGACATACTGGCTTTCAAACGAGATCATGTTGCTCATAATATGCTGGTTCATAGTCCTTTCTTCTTTACCAATGGAAGTTCTGAATCAGCTACAACTTCACTCAAAGGACATACTGATAACTACAAATCGTGCAGTGACGTAATGCAAAGATCAGATGATGTAACTGTGGACAGCTCAGTTTCTGCTAAAAAACGCACTAGAGCTGCAGTGACCATGGAAAGCAATCAAAGGACAGATGACAATTGTTCAACGTCACAAAGCAGTTATAGCCGAAATGTCATCATGGACAGAGTTAAGTTTTCGGTAAAGCAGATACCTCAGAGGGCATTTCTAAATAACATGGATGATGGTGGATGGAAATCAAAGTCCCGAAAGCATTCTGAAATGCTCGAAAAGGAGCTTGTAATGACTTCAGATGAGGCGTCTATGAAAAATTCAATGTTGCCAAAGGGGTACGCATATGTTCCTGCTGATTTCCTGTCAAATGACATGCAGCAGCTCAATCGGGACAGACCATTAGAAAATGACGGGTAG 4290 0.4317 MRWWWCTVLLSVVTEGQFHGREKMMGQGGAGGCGTEERPCPASRLELELEAKEDTGSPLIDFYSQARKALCERSPFDVAEESTSGSVIVTTLKSGLPSSLNRHSESRRRYRKSHSGADKKSSRAGDRSQSNSIWVEMEECFRNLSLPDIDCILQLSSFSDLANRKCFSIPKLEHQPSSSDAGGVVSGREITRNENAGHVKNEDSSMVVDNTEGDVSPSEDKECSTSHCSDSLGWLLGCRNKIYLSCERPSKKRKLLGGDAGLDKVLIARPCEGVSSLCHYCSTGESGNKSSGLIVCSYCKVAVHRKCYGVQDGVDGPWLCAWCEQNSGVGLVGDVANTCVLCPKKGGALKPAYRNVEDGGSVEYAHLFCCLWMPEVYIEDLSRMEPIMKISGIKEARRKLICNVCKMKSGACVRCSNGACRTSFHPICAREAKHKMEIWAKHGNDDVELRAFCSKHSETRDNVVLWSDNSLPFGDPDFSAVNNCPVTFPLPHKSKLDHDNGDMGGSMEASYKFGNSDNESQETTSSASKSGATVLIEGDDRQHINDAGGLIAKSDEDVYPSDSVHFTVVLKKLIDLGKVDIEDVAPDIGISPELLIANLSDDSMSPEVRFKIATWLRSHAYMNTFQKNLRFRVKPVNSRKDEIGDYGYDSLAVSGPGIVDPVAVKSVPPRRRTINNIRLLKDNSLKSSGVAISTDVSHMEDCEADQPLISSPDTVSMRPEISQAPLENNSLDKPCNTSMSERVVGKETVTYMQNSVGGGDADPCCLDTTAAKTADSAFISTELVSSYIHPYVRGKLMQIQKGFPLEGIRHSWKDDPTPVDAVCCDNHDHHSDNHGAVTSLDQSNAEKLVLARKMRLLESCPEDEVEGEIVYFQHRLLLILAARKQCTDNLICNVVKSLPAEIDATRQQQWDAVLVNHFLSDLKEAKKQGRKERRHKEAQAVLAAATAAAASSSRVSSFRKDALDESTTHENMFKLDASAGRSGITSQLLPKARETLSRVAVTCNSTEKHSGLGLTELDHPREHPRSCDICRRSETISPIFTCSSCKVAVHLDCYRSVKESMGPWYCELCGSVAYRTSGVPAVNFRDKPPFIVKCSLCGGATGAFRKTSDGQWVHAFCAEWVFETTFRRGQLHPVEGMETLLRGTGACCICRRNYGVCIKCDYGHCLTIFHPSCARCTGLYMSVRTVNGNLQHKAYCERHSLEQRAKAETQKHGTEELKNIKQIRVELERLRLLCERIVKREKIKRELVLCSHDILAFKRDHVAHNMLVHSPFFFTNGSSESATTSLKGHTDNYKSCSDVMQRSDDVTVDSSVSAKKRTRAAVTMESNQRTDDNCSTSQSSYSRNVIMDRVKFSVKQIPQRAFLNNMDDGGWKSKSRKHSEMLEKELVMTSDEASMKNSMLPKGYAYVPADFLSNDMQQLNRDRPLENDG* 1430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01045 1429 CDD ePHD 1094 1199 - -
Pte8g01045 1429 ProSitePatterns Zinc finger PHD-type signature. 278 323 IPR019786 -
Pte8g01045 1429 ProSiteProfiles Zinc finger PHD-type profile. 1024 1072 IPR019787 -
Pte8g01045 1429 ProSiteProfiles Extended PHD (ePHD) domain profile. 336 457 IPR034732 -
Pte8g01045 1429 SMART PHD_3 1026 1070 IPR001965 -
Pte8g01045 1429 SMART PHD_3 277 324 IPR001965 -
Pte8g01045 1429 SMART PHD_3 1146 1200 IPR001965 -
Pte8g01045 1429 SMART PHD_3 401 457 IPR001965 -
Pte8g01045 1429 ProSitePatterns Zinc finger PHD-type signature. 1027 1069 IPR019786 -
Pte8g01045 1429 MobiDBLite consensus disorder prediction 498 530 - -
Pte8g01045 1429 SUPERFAMILY FYVE/PHD zinc finger 273 325 IPR011011 -
Pte8g01045 1429 MobiDBLite consensus disorder prediction 511 530 - -
Pte8g01045 1429 Coils Coil 919 939 - -
Pte8g01045 1429 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 270 328 IPR013083 -
Pte8g01045 1429 ProSiteProfiles Zinc finger PHD-type profile. 275 326 IPR019787 -
Pte8g01045 1429 MobiDBLite consensus disorder prediction 96 130 - -
Pte8g01045 1429 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 333 459 IPR013083 -
Pte8g01045 1429 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1091 1201 IPR013083 -
Pte8g01045 1429 Pfam PHD-finger 291 324 - -
Pte8g01045 1429 Pfam PHD-finger 1037 1069 - -
Pte8g01045 1429 ProSiteProfiles Extended PHD (ePHD) domain profile. 1091 1200 IPR034732 -
Pte8g01045 1429 MobiDBLite consensus disorder prediction 192 218 - -
Pte8g01045 1429 Pfam PHD-zinc-finger like domain 338 456 - -
Pte8g01045 1429 Pfam PHD-zinc-finger like domain 1092 1199 - -
Pte8g01045 1429 PANTHER PHD FINGER PROTEINS 98 985 - -
Pte8g01045 1429 SUPERFAMILY FYVE/PHD zinc finger 1016 1069 IPR011011 -
Pte8g01045 1429 Coils Coil 1220 1240 - -
Pte8g01045 1429 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1004 1076 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01045 Pte-Chr8 34670067 34678851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01045 277 458 C2H2 Transcription Factor Family AT3G14740 30.645 5.46e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01045 - - qsa:O6P43_015236 1484.16