Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01039 ATGGCAGCTTCTGTCCAAAAACGCCAGTACGCCGGTCTTGAACCTCCCATAAACGGCATAATACGTACCTTCAAACCCGGAGGTCAGAACCACCTGTCCGATTCCTCGGTCCGCAGCTACAACTTGCAGGCAGACCAGGGAACGAGCAACCCTAAGAAAACAGAACCATTGGCCTTGGAATTCGATTCCTCTAGCGATGATGACGAAAATGACATTGATAATTTGAAGCTGTTGATACATAAGGTAAACAGCGAAGTCGAGCCATCCAGCTTGGACTTCAGAGATGGAGAAACAGCCGATAATTGGATAGAGCGGAATGCTTCCATGGTCCGTCTCACTGGAAAGCATCCCTTCAACTCTGAGCCTCCATTGGCTCGCCTCATGCACTGCGGCTTCATCACTCCGGTTCCACTTCACTATGTGCGGAACCACGGTCCAGTCCCCAAAGGCCGATGGGAGGACTGGACGGTCGAGGTCTGTGGCCTCGTGAAGCGACCCGCTCGGTTCACTATGGAAGAACTGGTGAATGATTTTCCAAGTCGGGAGTTTCCCGTTACGCTTGTATGTGCCGGAAACAGACGCAGAGAACAAAACATGGTGAAACAGAGCATCGGTTTCAATTGGGGTGCAGCAGCCATTTCTACTTCGGTGTGGAGAGGTGTACCGTTATATCATGTTTTGAAGCGGTGCGGAATTTACAGCAAGAAAGGTGGGGCCCTTCATGTGTGCTTTGAAGGGGCTGAGGATCTGCCAGGTGGCGGTGGATCCAAGTATGGTACTAGTATCAAGCGGGAGATAGCCATGGATCCAGCCAGAGACATCATACTGGCTTACATGCAAAACGGTGAGCACTTGTCTCCGGATCACGGATTCCCTGTCCGGATCATCATACCCGGTTTCATTGGTGGGCGTATGATTAAATGGTTGAAGCGGATCATAGTAACTACACCAGAATCCGACAACTATTATCATTATAAAGACAACAGAGTACTTCCCTCCCATGTTGACTCTGAACTCGCTAATGCTGAAGCGTGGTGGTACAAGCCAGAGTATATAATCAACGAACTGAACATAAATTCAGTGATAACGACGCCGAGTCATGAGGAAATTTTGCCGATAACCACGTGGACCAGTCAAAGCACATACACGATGAAGGGTTACGCTTATTCTGGGGGTGGGAGGAAAGTGTCACGTGTGGAGGTGACAGTGGACGGTGGTGAGAGTTGGCACGTGTGTGATCTGGACCATCCAGAGAAGCCAAACAAGTATGGTAAATACTGGTGCTGGTGCTTCTGGTCCCTTGAGGTTGAAGTGTTGGACCTTCTTGGAGCGAAAGAAATTGCTGTTCGCGCTTGGGATGAGGCACTCAACACTCAACCAGAGAAGCTCATTTGGAATCTTATGGGTATGATGAACAACTGCTGGTTCAGAGTGAAAACCAATGTGTGCAAGCTACAACGCAAAGGTGAGATTGGAATCGTCTTCGAACACCCAACTGTGCCTGGAAACCAATCAGGTGGTTGGATGGCGAAGGAAAGACATTTAGAGCAATCATCGGATTCCATCCCAACCTTGAAGAAGAGTGTCTCATCTCCATTCATGAACACCTCATCCAAGATATTCTCTATGTCTGATGTAAAAAAGCACACTACTGCTGACTCTGCTTGGATTGTTGTCCATGGTCATGTTTATGACTGCTCCCTTTTCCTCAAGGACCACCCTGGTGGCGCAGATAGCATTCTCATCAACGCTGGCACTGATTGCACTGAAGAGTTCGAGGCCATTCACTCTGACAAAGCCAAGAAAATGCTCGAAGAATATCGAATCGGAGAGCTCGCCCATGGCTACACCTCTGACTCGAATACTTCCTCCCCAAATATCTCAATGCATGGCCCCACGATTAGTCATTCTAGCTCTTCCCACCATTTGACTACCATTGAAGAAGTAATTCCAGCTGCTAAAAAAGTTGCACTGATCAATCCACGCGAGAAAATCTCATGCAAGCTTGTAGCGAAGACTGCGATTTCACATGATGTGAGGTTGTTCAGGTTTGCCTTGCCATCTGACGATCAAATCTTGGGTCTACCAGTGGGGAAACACATATTCATGTGTGCCAACATAGATGAAAAACTTTGTATGCGTGCCTATACTCCAACCAGCAGCGATGACGAAGTGGGGCATTTCGAATTATTGGTGAAGATATACTTAAAAGGTGTACATCCCAAGTTCCCTAATGGCGGTCTGATGTCTCAACACCTTGAATCTCTTCCTCTAGGGTCTGTGCTTGAAGTGAAAGGTCCATTAGGTCACATTGAGTACACTGGTCGTGGCAACTTCCAAGTTCATGGCAAACACAAGTTTGCAAAGAAACTAGCCATGATTGCAGGTGGTACAGGAATCACACCCGTATATCAAGTGGTGCAAGCCATTCTGAAAGACCCAGAGGATCAGACTGAGATGTATGTTGTGTATGCAAATAGAACTGAAGATGATATTCTGCTGAGAGAAGAGCTTGACGAGTGGGCTAAGAAGTGTGATAGGTTTAAGGTTTGGTACGTGATTGAAAATGCAAAGGAAGGGTGGGAATACAGTGTGGGATTCATTACGGAGGCTATCCTGAGGGAGCACTTACCAGAAGGATCAGAGGACACGTTGGCATTGACTTGTGGGCCACCTCCTATGATTAAGTTTGCAGTACAACCAAATTTAGAGAAAATGAACTTTGATATTACAGAAAGGTTGTTGGTATTTTAG 2754 0.4717 MAASVQKRQYAGLEPPINGIIRTFKPGGQNHLSDSSVRSYNLQADQGTSNPKKTEPLALEFDSSSDDDENDIDNLKLLIHKVNSEVEPSSLDFRDGETADNWIERNASMVRLTGKHPFNSEPPLARLMHCGFITPVPLHYVRNHGPVPKGRWEDWTVEVCGLVKRPARFTMEELVNDFPSREFPVTLVCAGNRRREQNMVKQSIGFNWGAAAISTSVWRGVPLYHVLKRCGIYSKKGGALHVCFEGAEDLPGGGGSKYGTSIKREIAMDPARDIILAYMQNGEHLSPDHGFPVRIIIPGFIGGRMIKWLKRIIVTTPESDNYYHYKDNRVLPSHVDSELANAEAWWYKPEYIINELNINSVITTPSHEEILPITTWTSQSTYTMKGYAYSGGGRKVSRVEVTVDGGESWHVCDLDHPEKPNKYGKYWCWCFWSLEVEVLDLLGAKEIAVRAWDEALNTQPEKLIWNLMGMMNNCWFRVKTNVCKLQRKGEIGIVFEHPTVPGNQSGGWMAKERHLEQSSDSIPTLKKSVSSPFMNTSSKIFSMSDVKKHTTADSAWIVVHGHVYDCSLFLKDHPGGADSILINAGTDCTEEFEAIHSDKAKKMLEEYRIGELAHGYTSDSNTSSPNISMHGPTISHSSSSHHLTTIEEVIPAAKKVALINPREKISCKLVAKTAISHDVRLFRFALPSDDQILGLPVGKHIFMCANIDEKLCMRAYTPTSSDDEVGHFELLVKIYLKGVHPKFPNGGLMSQHLESLPLGSVLEVKGPLGHIEYTGRGNFQVHGKHKFAKKLAMIAGGTGITPVYQVVQAILKDPEDQTEMYVVYANRTEDDILLREELDEWAKKCDRFKVWYVIENAKEGWEYSVGFITEAILREHLPEGSEDTLALTCGPPPMIKFAVQPNLEKMNFDITERLLVF* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01039 917 SMART Cyt_b5_2 541 613 IPR001199 -
Pte8g01039 917 Gene3D - 355 530 - -
Pte8g01039 917 MobiDBLite consensus disorder prediction 42 68 - -
Pte8g01039 917 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 536 615 IPR036400 -
Pte8g01039 917 FunFam Nitrate reductase [NADH] 769 917 - -
Pte8g01039 917 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 761 909 IPR039261 -
Pte8g01039 917 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 94 353 IPR036374 -
Pte8g01039 917 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 569 576 IPR018506 GO:0020037
Pte8g01039 917 SUPERFAMILY Riboflavin synthase domain-like 656 774 IPR017938 -
Pte8g01039 917 PIRSF Nitr_rd_NADH 28 916 IPR012137 GO:0006809|GO:0042128|GO:0050464
Pte8g01039 917 Gene3D Translation factors 654 768 - -
Pte8g01039 917 FunFam NADH-cytochrome b5 reductase 652 768 - -
Pte8g01039 917 Pfam Oxidoreductase NAD-binding domain 793 899 IPR001433 GO:0016491
Pte8g01039 917 PRINTS Cytochrome B5 signature 563 573 IPR001199 -
Pte8g01039 917 PRINTS Cytochrome B5 signature 588 595 IPR001199 -
Pte8g01039 917 PRINTS Cytochrome B5 signature 573 587 IPR001199 -
Pte8g01039 917 PRINTS Cytochrome B5 signature 600 612 IPR001199 -
Pte8g01039 917 FunFam Nitrate reductase 96 345 - -
Pte8g01039 917 FunFam Nitrate reductase 355 532 - -
Pte8g01039 917 Pfam Oxidoreductase FAD-binding domain 667 773 IPR008333 -
Pte8g01039 917 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 161 196 IPR022407 GO:0043546
Pte8g01039 917 Pfam Cytochrome b5-like Heme/Steroid binding domain 543 613 IPR001199 -
Pte8g01039 917 FunFam Sulfite oxidase, mitochondrial 536 616 - -
Pte8g01039 917 Gene3D - 93 345 IPR036374 -
Pte8g01039 917 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 662 774 IPR017927 GO:0016491
Pte8g01039 917 Pfam Oxidoreductase molybdopterin binding domain 144 323 IPR000572 -
Pte8g01039 917 MobiDBLite consensus disorder prediction 615 634 - -
Pte8g01039 917 SUPERFAMILY E set domains 355 482 IPR014756 -
Pte8g01039 917 Gene3D - 769 912 IPR039261 -
Pte8g01039 917 PRINTS Cytochrome B5 reductase signature 714 721 - -
Pte8g01039 917 PRINTS Cytochrome B5 reductase signature 830 841 - -
Pte8g01039 917 PRINTS Cytochrome B5 reductase signature 693 704 - -
Pte8g01039 917 PRINTS Cytochrome B5 reductase signature 759 773 - -
Pte8g01039 917 PRINTS Cytochrome B5 reductase signature 792 811 - -
Pte8g01039 917 PRINTS Cytochrome B5 reductase signature 885 893 - -
Pte8g01039 917 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 818 827 IPR001709 GO:0016491
Pte8g01039 917 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 714 721 IPR001709 GO:0016491
Pte8g01039 917 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 792 811 IPR001709 GO:0016491
Pte8g01039 917 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 572 582 IPR001709 GO:0016491
Pte8g01039 917 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 885 893 IPR001709 GO:0016491
Pte8g01039 917 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 830 841 IPR001709 GO:0016491
Pte8g01039 917 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 861 877 IPR001709 GO:0016491
Pte8g01039 917 Pfam Mo-co oxidoreductase dimerisation domain 351 482 IPR005066 GO:0016491|GO:0030151
Pte8g01039 917 CDD cyt_b5_reduct_like 667 917 - -
Pte8g01039 917 CDD eukary_NR_Moco 95 480 - -
Pte8g01039 917 PRINTS Eukaryotic molybdopterin domain signature 196 208 IPR008335 GO:0016491
Pte8g01039 917 PRINTS Eukaryotic molybdopterin domain signature 286 299 IPR008335 GO:0016491
Pte8g01039 917 PRINTS Eukaryotic molybdopterin domain signature 463 476 IPR008335 GO:0016491
Pte8g01039 917 PRINTS Eukaryotic molybdopterin domain signature 269 285 IPR008335 GO:0016491
Pte8g01039 917 PRINTS Eukaryotic molybdopterin domain signature 353 365 IPR008335 GO:0016491
Pte8g01039 917 PRINTS Eukaryotic molybdopterin domain signature 110 124 IPR008335 GO:0016491
Pte8g01039 917 PRINTS Eukaryotic molybdopterin domain signature 450 462 IPR008335 GO:0016491
Pte8g01039 917 PRINTS Eukaryotic molybdopterin domain signature 398 410 IPR008335 GO:0016491
Pte8g01039 917 PRINTS Eukaryotic molybdopterin domain signature 132 148 IPR008335 GO:0016491
Pte8g01039 917 PRINTS Eukaryotic molybdopterin domain signature 425 435 IPR008335 GO:0016491
Pte8g01039 917 PRINTS Eukaryotic molybdopterin domain signature 302 315 IPR008335 GO:0016491
Pte8g01039 917 PRINTS Eukaryotic molybdopterin domain signature 384 398 IPR008335 GO:0016491
Pte8g01039 917 PRINTS Eukaryotic molybdopterin domain signature 185 196 IPR008335 GO:0016491
Pte8g01039 917 PRINTS Eukaryotic molybdopterin domain signature 211 226 IPR008335 GO:0016491
Pte8g01039 917 PANTHER SULFITE REDUCTASE 75 487 - -
Pte8g01039 917 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 538 613 IPR001199 -
Pte8g01039 917 Gene3D - 534 615 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01039 Pte-Chr8 34545843 34550171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01039 652 908 NADPH P450 reductases AT5G17770 38.462 1.96e-51 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01039 K10534 - qsa:O6P43_015229 1484.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g01039 8 34545843 34550171 Pte8g01039 8 34545843 34550171 RCT