Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01034 ATGAGTAAGCCTCGAACTCAAAGGAAAACCAATGTAAAAGTCAAAGAAAGCAAACCTCAGCTGTCTCAGAAGACAGAGAAACAACCTTCATGGGCTGTTGTGCGAGGCCTACTGACGTGTAGGAACCTACAAACTCAGCAACAGACACAACAGTTGCAGCAACAGCAGAAACTGTCAGCAGAAAAGCAAACGAAACAGCAGGTAGCACAGAGGAAGAAGGTAAAGCTTCAGGAGCAGGCAGCTGAAGAAAGCAGCAAGAAATGTAAGAAGATGAGGTGCTCGGGTTCGCTATGTAGTAACACGAAGGTCATGCACAGACCTGAAGCTGCATCTCCCGATATCCATAAGAAAAGAAACTCATCACTTGGTTCCAGCAACCACCACCACAGTGATGCTTCTAGTAGATCTGGGAAAGCTCCATTACGTGAACTCAATGAGGTTGTTTCTGCTTCTTCTAACTCTACTTCTGCTGCTGGAGGTTCGTTCAAAGTCATGCCCTTCAGGAGATTCTCTGGCTTCTCTGGCTGTTACGAATGTAGAATGGTGGTTGATCCCGTTCTTGGTTTCACAAGAGACCCTTCTCTTAGGAGCAGCATTTGTTCATGTCCTGATTGTGGTGAGATCTTCATGAAACCTGAGAATCTGGAGCTCCATCAGTCTGTTAAACACGCAGTGTCTGAATTGGGTCCGGAAGATACAAGCAAGAACATAGTGGAGATTATATTTCAATCAAGCTGGCTGAAGAAGGAATCCCCAGTGTGTAAAATCGACCGTATCCTTAAGGTTCACAATACTCAGAAGACCATAAGCAAATTCGAAGAATACAGAGAATCCATCAAAGCCAAAGCCGCCAAGCTCACAAAGAAACACCCACGATGCATTGCTGACGGAAACGAGCTCCTAAGGTTTCACTGCACTTCCCTTGTCTGCTCACTAGGACTGAATGGTTCCTCCAACCTCTGCAGCTCAATCTCACAATGCAATGTCTGTAGCATCATCAAGAGTGGCTTCAGGGTTGTGGAGGAAGCAAATGGAGGGATTGCTGGGAAGGGAATATTGACAACTGCAACCAGTGGAAGCGCACATGATAATGCTGGAGTTGTTGGAGACAGTGGCAACAACAACAAGAACAAAAGGGCAATGCTAGTTTGTCGAGTGATAGCAGGCAGAGTGAAGAAGCACATGGAAGGAGGAATGGAAGAGTATGATTCAGTTGCAGGGGCTACTGGGGCTTACACCAATTTAGATGAGTTGCGTGTGTTCAATCCTAGAGCTATATTGCCTTGCTTTGTTGTAATCTATACAGGTTTCTAA 1314 0.4559 MSKPRTQRKTNVKVKESKPQLSQKTEKQPSWAVVRGLLTCRNLQTQQQTQQLQQQQKLSAEKQTKQQVAQRKKVKLQEQAAEESSKKCKKMRCSGSLCSNTKVMHRPEAASPDIHKKRNSSLGSSNHHHSDASSRSGKAPLRELNEVVSASSNSTSAAGGSFKVMPFRRFSGFSGCYECRMVVDPVLGFTRDPSLRSSICSCPDCGEIFMKPENLELHQSVKHAVSELGPEDTSKNIVEIIFQSSWLKKESPVCKIDRILKVHNTQKTISKFEEYRESIKAKAAKLTKKHPRCIADGNELLRFHCTSLVCSLGLNGSSNLCSSISQCNVCSIIKSGFRVVEEANGGIAGKGILTTATSGSAHDNAGVVGDSGNNNKNKRAMLVCRVIAGRVKKHMEGGMEEYDSVAGATGAYTNLDELRVFNPRAILPCFVVIYTGF* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01034 437 SUPERFAMILY ADP-ribosylation 225 436 - -
Pte8g01034 437 ProSitePatterns Zinc finger C2H2 type domain signature. 200 223 IPR013087 -
Pte8g01034 437 Gene3D - 224 435 - -
Pte8g01034 437 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 88 434 - -
Pte8g01034 437 ProSiteProfiles Zinc finger C2H2 type domain profile. 200 228 IPR013087 -
Pte8g01034 437 MobiDBLite consensus disorder prediction 1 28 - -
Pte8g01034 437 MobiDBLite consensus disorder prediction 104 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01034 Pte-Chr8 34495399 34497529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01034 162 434 C2H2 Transcription Factor Family AT1G75710 51.342 2.48e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte8g01034 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01034 - - qsa:O6P43_015222 599.356