Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01027 ATGGAAGAGCAGGCAGCATGTGGTAAGTTCAGCCAGATGCTTAACAGAATCAAACCTATCTTAGCTATAGTCTCCCTTCAGTTTGGCTATTCTGGAATGTATATCATCACCATGGTGTCCTTCAAGCATGGAATGAGCCACTACATTCTCTCTGTGTACCGTCATGTGGTCGCATTGCTTGTCATTGCACCCTTTGCCATTGTTCTCGAGAGGAAAATAAGGCCAAAGATGACTCTACCTGTTTTTCTGAGGTTATTGGCGCTTGCTTTCCTCGAGCCAGTGCTCGACCAGAATTTATACAACATGGGAATGAAGGCCACCTCAACAACATATGCTTCTGCTTTTGTCAATCTTCTGCCTGCCATTACTTTCGTATTGGCATTGATTTTCAGGTTAGAGACTGTTAACATCAGAAAAATTTATAGTGTGGCCAAGGTAATTGGCACAGCAATTACTGTTTGTGGAGCAATGGTCATGACTTTGTACAAAGGACCAATGCTTGATATCATAAAGGGAAGAGGACAAATTAACCACCGTGCAACTAGCGAAGAGGCCTCGGCACAGAACTGGGTTACTGGCACACTAATGCTCATAGCAAGTTGTGGGAGTTGGGCCAGCTTCTTCATCTTGCAATCACTCACTTTGAAGCTATACCCAGCTGAGCTCTCCCTCACAGCTTGGATCTGCTTGCTGGGTATTTTGGAGGGTTCAATCGTGTCTCTCATCATGGAACGTGACATGAGTGTCTGGGTTATTGGATGGGACTCGAGACTTTTGGCGTGTGTTTATTCTGGAGTGATTTGCTCTGGAATGGCATACTATGTACAAGGAATGGTAATCAGGCAACGTGGACCAGTTTTTGTCACTACATTCAGTCCTCTTTGTATGATTATCACTGCTGTATTAGGCACAGCTGTATTAGCAGAGAAACTGTATCTTGGGAGTGTGATTGGGGCAATTGTCATTGTGACCGGACTTTACACAGTGGTGTGGGGCAAAAGTAAAGACCGATCAAGCTCGACGGAGGTATTATACGACGAGAAAGATGGGTTGCCTATAAGGGACAGCACAAGACCAACTGTTAGCTATAGAAACAATGAGATGAAAGTGGATGGTGGCATGTCAAAGGGTTCTGTCAAGACTGAAATTCCCTTAGCTACGAGGACAGCATGA 1173 0.4467 MEEQAACGKFSQMLNRIKPILAIVSLQFGYSGMYIITMVSFKHGMSHYILSVYRHVVALLVIAPFAIVLERKIRPKMTLPVFLRLLALAFLEPVLDQNLYNMGMKATSTTYASAFVNLLPAITFVLALIFRLETVNIRKIYSVAKVIGTAITVCGAMVMTLYKGPMLDIIKGRGQINHRATSEEASAQNWVTGTLMLIASCGSWASFFILQSLTLKLYPAELSLTAWICLLGILEGSIVSLIMERDMSVWVIGWDSRLLACVYSGVICSGMAYYVQGMVIRQRGPVFVTTFSPLCMIITAVLGTAVLAEKLYLGSVIGAIVIVTGLYTVVWGKSKDRSSSTEVLYDEKDGLPIRDSTRPTVSYRNNEMKVDGGMSKGSVKTEIPLATRTA* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01027 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 335 - -
Pte8g01027 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Pte8g01027 390 Pfam EamA-like transporter family 28 159 IPR000620 GO:0016020
Pte8g01027 390 Pfam EamA-like transporter family 193 330 IPR000620 GO:0016020
Pte8g01027 390 PANTHER WAT1-RELATED PROTEIN 18 339 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01027 Pte-Chr8 34418402 34422391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01027 14 373 Nodulin-like Gene Family AT4G08300 64.754 1.97e-168 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01027 - - qsa:O6P43_019743 563.918