Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01009 ATGTCAAAGTCCTCCTCCCTTGCACTAGAGGGGCCCAATGGAAAAGTGGGAATGGATGATCCAGAATCCACAGTGAATACAATTGCTCGTGTTATTGAGCAATTGCATGCAAACAAATCATCACCACACGAAAACGAACTTATAACTGCACGTTTGCTGGGTATTTGTAAGGAAAAAAAGGATGCGAGGTTGTTCGTTGGCTCACATGCTCTTGCAATGCCATTGTTTATAAACATTCTGAGGAATGGAACCGCTTTGGCCAAAGTTAATGTTGCTGCCACTCTGAGCATCCTGTGCAAAGATGAAGATTTAAGGGTAAGAGTCCTTCTAGGTGGTTGCATCCCACCACTGCTTTTACTTCTGAAGTCCACTTCAACTGATACCCGAAAAGCAGCAGCGGAAGCAATATATGAGGTTTCCTCTGGTGGCCTTTCAGATGATCATGTAGGTAGAAAAATTTTCATCACTGAAGGAGTATTGTCAACCTTATGGGATGAGCTGAATCCAAAGAACAAACAGGACAAAGTTGTGGAGGGGTTCATCACAGGAGCATTAAGAAATTTATGTGGTGACAAAGATGCACATTGGAAGGGGATGCTAGAGGCTGGAGATGTAGATATTATTGTGAGTCTGCTATCTTCTGGTGATTCTGTTGTGATGTCCAATGCAGCCTACCTGTTGGCACGTTTTCTGTTGGTTTTCCGTGATAGCATCCCTAAAGTGATAGATTCTGGAGCAGTCCGTATTTTGCTTCAGCTCCTTGGTCAGAAACATGATATTTCTGTACGATCAAGTGCTGCTGATGCATTAGAGGCTCTTTCTTCAATCTATTTAGGAGCAAAAAAAGCTATCAAGGATGAGGACGGTGTTCAAATCCTGATAGGATCTATAGTTGCTCCTTCTCTGGAGTGTATGCAGGGTGAGTGGTGCCACAGTTTACAGGAACATGCAACTCGTACTCTAGCAAACATATATGGTGGGATGTCTGCTTTAATACTGCATCTTGGAGAACTTTCTCAAACTGATTGCATTGATGCACCAGTTATTGATACAATTGGGGCACTTGCCTATACTTTGATGGCATTTGAACGGAAGGATGATGTAAATGATGAACTTTCTGATGCAAGTCAGATAGAACTTATTCTGGTGAAGCTATTGAAGCTTCGAAATACCAAACTTTGTAGAGAACGTGTCCTAGAGGCTTTGTCAAGTCTATATGGAAACATCTATTTGTCTAGGAGTCTCAAACATGCACATGCAAAGAAGGTTCTTATAGGCCTCACAACATTGTCTGCTGCAGATGTGCAAGAGCACCTGGTACTTTCTTTTACAAGGTTATGCTGTGAAGGGGTAAGCATTTGGGAGGCCATAAACAAAAGAGAGGGCATCCAATTGTTAATGTCGCTGTTTGGTTTATCTAGTGAGCAACATCAAGAATTTGCAGTTCAATTTTTAGCAATATTGACCGATCAGGTTGATGACAGCAAGTGGGCTATCACTGCTGCTGGAGGGATACCCCCATTAGTACAGTTGTTGGAAACGGGATCAATGAAAGCAAAAGAGGAAGCTGCACATGTGCTGTGTAATTTATGCAGCAATAGTCAAGATATCCGTGCATGCGTGGAAAGTGCAGGGGCCATCCCTGCTTTCTTATGGGTTCTGAAGAGCAGTGGAATGGTTGGGAAAGAAGCATCTGCAAGAGCACTCAGAAAACTTGTCCAAACTGCGGATTCTGCTACCATCAATCAGTTGCTAGCATTGCTCCTTGACGAATCTGCTAATTCAAAAGCTCATGTAATTAAAGTTCTAGGTCATGTTCTTGCTATGGCTTCTGTTGAGGATCTTGTGCAAAATGGTTCTGCTGCTAATAAAGCATTGAAATCTCTCGTCCTGGTCCTCAACTCTTCAGCCGAAGAAACCCAGGAATGTGCAGCTACTGTCTTAGCTGATCTTTTCAGTGCAAGGCAGGACATCTGTGAGAGTCTGGCAACTAATGAGATTATTCTTCCTTGCACAAAGCTTTTGTCTAGCAAAACTCAATTTGTTGCTGCACAACTTGCTAGAGTTTTGGGTGCTTTGTCTAGCCCAACCAAGAGAAATGACACTTCAAGAAAAAGACCTAATATTGCAGAGGGTGATCTCAAGCCTTTAATTAAATTGGCAAAAACTGCTGCCATTGATGCTGCCGAAACTGCAGTTGCAGCATTGGCTAATCTTCTATCTGATCCTGTTCTCGCTGAAGAAGCCCTCACAGAGGATATATTTTCTGTTTTAACAAGAATACTGGAAGATGGTACTGTAGATGGAAAAAAAAGTTCTTCTCGTGCACTTCACCAATTACTGAAGCATTTTCCCATTTTTCATGTTCTGAAGGAAAAGGCCCAGTTTTGCTCTACCATTTTGGCTCTAGTTAATGCTGTGAATGCAATGGATATGGACAAGACTGATGCTGCAGATGCTCTACAAGTAATTGCACTCTTGACGAGGTCAGAACAAGGGGAGAGTTTAATGTATCCTTCATGGTCTCCTCTTACTGAAATGCCATCAACATTGGAAACTCTCATCAGCTGCCTGGTTGAGGGCCCTCCTTTAGTTCAAGATAAGGCAATAGAAATTTTATCTAGACTTTGTGCGGATCAGCCTGTTTTGCTTGGGAATCTTCTGGCTTCTAGGTCTAGATCCATTGCTGCACTAGCCTATAGATTAATAAACTCCTCCTGCTTAGAAGCCAAAGTTGGAGGAGCTGCATTACTTGTTTGTGCTCTAAAGGAGAATAAACAGCAATCAATGGATGCACTTGATGTATCAGGGTATATGAAGCCCCTTATTTATGCACTGGTTGACATGATGAAGCAAAACTCAAGCTGTTCGTCTCTAAAAATTAAAATGATATCCCCAAGATGTTATGTGGATAGAAATGCATTTCAGGAAAGTCATCAATTTGATTTTTTGGGTCGAACCACCATCTTGGGTGGAACTGTTGCCTTGTGGTTGCTGTCTATTGTTTCCTGCTTTGATACAAAGGAAAAGTTTAACGTTGTTGAGGCTGGTGGACTTGAGCTGCTCTCTGACAAGCTTGCAGTTCATATTTCAGAAGCACAGGAAGAAACCGAGGACAAGGAAAGTCTGTGGATTATTGCCTTGCTAGCAGCCATCTTATTCCAAGATGCAAGCATTGGTACTTGCCCTGCTGCTGTGAGCATCATCCCTTCCCTGGCTCTTCTACTGGGGTCAGATGAGTTGATAGAGAAATTTTTTGCTGCCCAGGCAATGGCCAGTCTTATTTGTAATGGAAGCAAGGCAATTAATCTTGCTATTGCAAAATCAGGGGCTGTTGCTGGGTTGATAAATATAATTGGTTACTTAGAATCAGATATGCCAAACCTTGTTGGTTTGTCTGAAGAATTTTCTCTGGTGAAAACCCCAGATCAAGAGGTCCTTGCCCACCTTTTTGAAATGGACGATGTAAGGGCTAGTTCAACTACACGCAAATCCATACCTCTTTTGGTGGATCTCTTGAGACCTATACCAGAGAGGCCTGGCGCCCCTCCTGTGGCCGTTCGACTTTTAACTTGCATTGCAGATGGAAATGATACAAACAAATTAATCATGGCTGAATCCGGAGTTTTGGATGCTCTGACAAAGTATCTGTCTTTAAGCCCTCAAGAATCAACCGAAGCTTCTGTATCAGAGTTGCTGAGGATACTGTTTGCCCATCCCGATCTCGTTAAATATGAAGCATCGACAAGTTCCCTCAACCAGCTGATAGCTGTTTTGCGTCTTGGGTCTAAACGGGCTAGATTCAGTGCTGCCAGGGCACTTCATGAACTTTTTGATTCTGAGACCATTAGAGATTCTGAATTAGCAAACCAAGCTATCCAGCCTTTGGCTGACATGCTTGACACAACATCAGAGAAAGAACAGGAGGCTGCTCTTCTTGCCTTGATCAAGTTGACTTCAGGAAGTTCGTCCAAATCCGCTCTTCTAACTGAGATTGAAGGAAATCCACTGGAGAGTCTATATAAAATATTATCTTCTGATTCAACGCAGGAATTAAAGAGTTATGCTGCAGACCTATGTTGTGTTCTTTTTACTAATAGTAAGGTCAGAGCAAACCCACTGGCCTCAGGATGCATTGAGCATCTTATATCCTTAATGCAATCTCATTCTATCTATGCTGTAGAATCTGGTGTCTGTGCATTTGAGAGTTTATTAGCTGATGAACAACAGGTTGAGCTTGCAGTAGCCCATGATATCTTGGATCTCCTAGTTAATTTGATTACAGGCACAAATTATCGGCTTATTGAGTCTTCCATCTGTTCTCTTATTAAGTTAGGGAAAGACCGGAGTCCCTGCAAATTGCAGATGGTCAAAGCTGGTGTTATAGATAAATGTCTTAATTTGCTGCCAGACGCTCCTAGTTCATTATGCTCGACTGTTGCAGAACTATTCCGCATTTTGACAAATAGTAGTACGATTGCTAGAAGTTCTTCTTCTGCCGTAATGATTGATCCGCTGTTCCACATTTTGCTTCTTCCAGATATAACTTTATGGGGACAGCATAGTGCCTTGCAAGCACTAGTAAATATTTTGGAAAAGCCGCAGAGTCTTGATAATTTAAATCTCACTCCAAGCCAAATTATTGAGCCTCTGATTTCATTTCTGGAGTCCCCATCCCAAGCTATCCAGCAGCTTGGCACAGAACTGTTATCTCATCTTCTTAAACAAGAACATTTTCAGCAAGATATTACAACAAAAAATGCAGTTGTGCCACTTGTGCAGCTTGCAGGAATTGGAATATTGAATCTACAGCAAACATCAATTAAGGCACTGGAAAAGATATCTAAAAGCTGGCCAAAGGCTGTGGCTGATGCTGGAGGTATTTTCGAGCTTGCAAAAGTTATCATTCAAGTCGACCCTCAGCCATCAGATGCAGTTTTGGAATTGGCGGCTCTGGTTCTCTCTAACATACTGCGTTTCAACTCTGAGTACTACTTTAAAGTTCCTGTTTTGGTTCTTGTAAATATGTTGCACTCAACTTTGGACAGCACAGTTGAGATAGCACTCAAAGGCCTTTCCATCCATGAAAAAGCTGATGCTTCAAGTGCTATACAGATGTCAGAAGCAGGTGCTATAGATGCTCTATTGCAGCTTATGAGATCCCACCATTGTGAAGAAGACTCTGGAAGGTTGCTTGAAGCTTTATTCAACAATGCAAGAGTCCGGGAGATGAAACTAGCCAAGTATGCTATAGAGCCTTTGTCACACTATCTGTTGGATCCACAAACCAAATCACAGAATGGCAAGCTACTTGCTGCTCTGGCTCTGGGAGACCTTTCTCAGAATGAATCACTTGCTAGATCCAGAAGTTCTGTTTCTGCATGTCGTGCCTTGATAAGTTTGCTCGAGGATCAACCAACTGAAGACATGACAATGGTAGCAATATGCGCATTGCAAAATTTCGTCATGAATAGCAGGACTAATAGGCGAGCTGTTGCTGAAGCGGGTGGCATATTAGTGATTCAGGAGCTTCTTCTGTCTTCTTATCCGGATGCTGTTGCACAAGCAGCAGTGCTGATCAAGCTTCTGTTTTCCAGTCACACATTGCAAGAATATGTTTCAAATGAGCTGATAAGATCTTTGACAGCTGCCCTTGAAAGAGAATTGTGGTCCACTGCTACCATCAGCGAGCACGTGTTGAAAACTTTGAATATGATAATCCTGAAGTTTCCTAAGCTCCATACATCTGAAGCTGTTACATTGTGCATCCCTCATTTAATAGGGGCACTGAAATCTGGGAGCGAAAGAGCTCAGGATTCTGTACTCGAGACCTTATGTGTGCTAAGACAATCTTGGTCTACTATGCCAATAGATGTAGCAAAATCACAGGCGGCCGTTGCATCAGAAGCCATTCCTATTCTGCAAATGCTCATGAAAACCTGCCCACCTGGTTTCCAGGAGAGAGCAGATAGCCTTTTGCATGGCTTGCCAGGCTGTTTGACTGTTACTATCAACCGTGGTAACAACCTTAAGCAGGCCATGGGAAGCACCAATGCATTTTGCCAATTGACTCTAGGCAATGGTCCCCTGAGACGAACAAAGGTGATAAGTCATAGTTCCTCCCCCGAGTGGAAAGAAAGTTTTACTTGGGCATTTGATGTACCTCCAAAGGGGCAAAAACTCCACATTGTTTGCAAAAACAAGAGTACTTTCGGGAAGACAACTCTGGGAAGAGTGACCATCCAAATTGACAAGGTTGTAAGTGAGGGAGTTTACAGTGGATTGTTCAGCCTTAATCACCATGATAGTAACAAAGATGGCTCTGCACGGACACTTGAAATTGAAATTATCTGGTCCAACATGGTATCAGAATCCAATGTTGATGCCTTATGA 6393 0.4255 MSKSSSLALEGPNGKVGMDDPESTVNTIARVIEQLHANKSSPHENELITARLLGICKEKKDARLFVGSHALAMPLFINILRNGTALAKVNVAATLSILCKDEDLRVRVLLGGCIPPLLLLLKSTSTDTRKAAAEAIYEVSSGGLSDDHVGRKIFITEGVLSTLWDELNPKNKQDKVVEGFITGALRNLCGDKDAHWKGMLEAGDVDIIVSLLSSGDSVVMSNAAYLLARFLLVFRDSIPKVIDSGAVRILLQLLGQKHDISVRSSAADALEALSSIYLGAKKAIKDEDGVQILIGSIVAPSLECMQGEWCHSLQEHATRTLANIYGGMSALILHLGELSQTDCIDAPVIDTIGALAYTLMAFERKDDVNDELSDASQIELILVKLLKLRNTKLCRERVLEALSSLYGNIYLSRSLKHAHAKKVLIGLTTLSAADVQEHLVLSFTRLCCEGVSIWEAINKREGIQLLMSLFGLSSEQHQEFAVQFLAILTDQVDDSKWAITAAGGIPPLVQLLETGSMKAKEEAAHVLCNLCSNSQDIRACVESAGAIPAFLWVLKSSGMVGKEASARALRKLVQTADSATINQLLALLLDESANSKAHVIKVLGHVLAMASVEDLVQNGSAANKALKSLVLVLNSSAEETQECAATVLADLFSARQDICESLATNEIILPCTKLLSSKTQFVAAQLARVLGALSSPTKRNDTSRKRPNIAEGDLKPLIKLAKTAAIDAAETAVAALANLLSDPVLAEEALTEDIFSVLTRILEDGTVDGKKSSSRALHQLLKHFPIFHVLKEKAQFCSTILALVNAVNAMDMDKTDAADALQVIALLTRSEQGESLMYPSWSPLTEMPSTLETLISCLVEGPPLVQDKAIEILSRLCADQPVLLGNLLASRSRSIAALAYRLINSSCLEAKVGGAALLVCALKENKQQSMDALDVSGYMKPLIYALVDMMKQNSSCSSLKIKMISPRCYVDRNAFQESHQFDFLGRTTILGGTVALWLLSIVSCFDTKEKFNVVEAGGLELLSDKLAVHISEAQEETEDKESLWIIALLAAILFQDASIGTCPAAVSIIPSLALLLGSDELIEKFFAAQAMASLICNGSKAINLAIAKSGAVAGLINIIGYLESDMPNLVGLSEEFSLVKTPDQEVLAHLFEMDDVRASSTTRKSIPLLVDLLRPIPERPGAPPVAVRLLTCIADGNDTNKLIMAESGVLDALTKYLSLSPQESTEASVSELLRILFAHPDLVKYEASTSSLNQLIAVLRLGSKRARFSAARALHELFDSETIRDSELANQAIQPLADMLDTTSEKEQEAALLALIKLTSGSSSKSALLTEIEGNPLESLYKILSSDSTQELKSYAADLCCVLFTNSKVRANPLASGCIEHLISLMQSHSIYAVESGVCAFESLLADEQQVELAVAHDILDLLVNLITGTNYRLIESSICSLIKLGKDRSPCKLQMVKAGVIDKCLNLLPDAPSSLCSTVAELFRILTNSSTIARSSSSAVMIDPLFHILLLPDITLWGQHSALQALVNILEKPQSLDNLNLTPSQIIEPLISFLESPSQAIQQLGTELLSHLLKQEHFQQDITTKNAVVPLVQLAGIGILNLQQTSIKALEKISKSWPKAVADAGGIFELAKVIIQVDPQPSDAVLELAALVLSNILRFNSEYYFKVPVLVLVNMLHSTLDSTVEIALKGLSIHEKADASSAIQMSEAGAIDALLQLMRSHHCEEDSGRLLEALFNNARVREMKLAKYAIEPLSHYLLDPQTKSQNGKLLAALALGDLSQNESLARSRSSVSACRALISLLEDQPTEDMTMVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLSSYPDAVAQAAVLIKLLFSSHTLQEYVSNELIRSLTAALERELWSTATISEHVLKTLNMIILKFPKLHTSEAVTLCIPHLIGALKSGSERAQDSVLETLCVLRQSWSTMPIDVAKSQAAVASEAIPILQMLMKTCPPGFQERADSLLHGLPGCLTVTINRGNNLKQAMGSTNAFCQLTLGNGPLRRTKVISHSSSPEWKESFTWAFDVPPKGQKLHIVCKNKSTFGKTTLGRVTIQIDKVVSEGVYSGLFSLNHHDSNKDGSARTLEIEIIWSNMVSESNVDAL* 2131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01009 2130 Gene3D - 1600 1997 IPR011989 -
Pte8g01009 2130 Gene3D - 619 837 IPR011989 -
Pte8g01009 2130 Gene3D C2 domain 1998 2127 IPR035892 -
Pte8g01009 2130 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 12 2120 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Pte8g01009 2130 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1997 2103 IPR035892 -
Pte8g01009 2130 SUPERFAMILY ARM repeat 849 1120 IPR016024 -
Pte8g01009 2130 Gene3D - 297 618 IPR011989 -
Pte8g01009 2130 Gene3D - 849 1132 IPR011989 -
Pte8g01009 2130 SUPERFAMILY ARM repeat 434 791 IPR016024 -
Pte8g01009 2130 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 503 545 IPR000225 GO:0005515
Pte8g01009 2130 Gene3D - 25 296 IPR011989 -
Pte8g01009 2130 CDD C2 2000 2090 - -
Pte8g01009 2130 Gene3D - 1333 1599 IPR011989 -
Pte8g01009 2130 Gene3D - 1137 1332 IPR011989 -
Pte8g01009 2130 MobiDBLite consensus disorder prediction 1 21 - -
Pte8g01009 2130 Pfam C2 domain 1999 2098 IPR000008 -
Pte8g01009 2130 SMART C2_3c 1999 2095 IPR000008 -
Pte8g01009 2130 SUPERFAMILY ARM repeat 1162 1488 IPR016024 -
Pte8g01009 2130 ProSiteProfiles C2 domain profile. 1979 2096 IPR000008 -
Pte8g01009 2130 SUPERFAMILY ARM repeat 1577 1994 IPR016024 -
Pte8g01009 2130 Pfam Armadillo/beta-catenin-like repeat 496 532 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 1911 1953 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 1197 1237 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 1279 1320 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 492 532 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 286 326 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 1615 1659 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 1536 1575 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 534 574 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 1825 1865 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 1737 1781 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 234 275 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 701 741 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 448 490 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 1366 1406 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 101 141 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 1449 1489 IPR000225 GO:0005515
Pte8g01009 2130 SMART arm_5 146 190 IPR000225 GO:0005515
Pte8g01009 2130 SUPERFAMILY ARM repeat 60 295 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01009 Pte-Chr8 34093799 34101901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01009 463 780 U-box Gene Family AT3G46510 25.466 1.01e-08 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01009 - - mof:131161490 2938.67