Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01008 ATGGCAGCGGATTTGAAGTTACCTCCTGGATTCAGATTTCATCCCACAGATGAAGAGCTAGTGTTGCACTACCTCTGCCGTAAATGTGCTTCGCAATCTATTGCCGTTCCGATCATTGCTGAGATCGATCTGTATAAGTTTAACCCCTGGGACTTGCCAGGTTTAGCCTTGTACGGGGAAAAGGAATGGTACTTTTTCACTCCCAGGGACCGGAAATATCCTAACGGGTCGAGACCGAACCGTGCTGCTGGGTCTGGGTACTGGAAGGCTACCGGAGCTGACAAACCCATCGGGAAGCCGAAACCAGTAGGGATCAAGAAAGCTCTGGTTTTTTATTCCGGGAAAGCGCCCAAGGGTGAGAAAACCGATTGGATCATGCACGAGTATCGCTTGGCTGATGTGGACCGCTCAGCTCGCAAGAAGAACAACTCAAGATTGGATGATTGGGTACTTTGCCGTATTTACAACAAGAAGGGCAATATCGATAAACGACCTCAGGGTCTTAGCCGGAAAATGGAGCCCGCGGAAATAGAAGACCAGAAGCCAGCGGTTCTGAAGGGCGGAGCAGCATTCCAACCTGCTCCAGTCTCGGTTCCTCCTCCATCCATGATGGCCAACGATTTCATGTACTTCGACCCGTCCGATTCCATACCGAAACTGCACACGGACTCGAGCTGCTCGGAGCAGGTGGTGTCCCCTGAATTCGCCAGCGAGGTGCAGAGTGAGCCCAAGTGGACTGGGTGGGACAACAAGAACGATCAGGATTTTCTTTATAATTACATGGATGCCACTCTAGGAAACGACCTTGCTTCACAGTTGCAGAGTGTGAATCAGATGTCGCCGTTGCAGGATATCTTCATGTACCTGCAGAAACCGTTTGGGATGTAG 888 0.5079 MAADLKLPPGFRFHPTDEELVLHYLCRKCASQSIAVPIIAEIDLYKFNPWDLPGLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKPVGIKKALVFYSGKAPKGEKTDWIMHEYRLADVDRSARKKNNSRLDDWVLCRIYNKKGNIDKRPQGLSRKMEPAEIEDQKPAVLKGGAAFQPAPVSVPPPSMMANDFMYFDPSDSIPKLHTDSSCSEQVVSPEFASEVQSEPKWTGWDNKNDQDFLYNYMDATLGNDLASQLQSVNQMSPLQDIFMYLQKPFGM* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01008 295 FunFam NAC transcription factor 16 161 - -
Pte8g01008 295 PANTHER NAC TRANSCRIPTION FACTOR 56 7 219 - -
Pte8g01008 295 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Pte8g01008 295 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Pte8g01008 295 Gene3D NAC domain 16 162 IPR036093 GO:0003677|GO:0006355
Pte8g01008 295 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01008 Pte-Chr8 34076864 34078792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01008 1 293 NAC Transcription Factor Family AT1G01720 70.861 1.08e-149 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte8g01008 NAM 2.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01008 - - rcu:8277764 443.736