Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01003 ATGGGAAGCCTGCAACAGCAGCAGCAAAACGGTATTGACATGGGCAGCAAACGTATAGCAGCTGTCAATGTCACATCACCGTACATTACTGGTCCTAATGATCTGCATAGTGATCAAGAGAAACCAGCATGGAAAAAGTTTCTTTCATTTGTAGGACCCGGTTTTCTTGTATCCATGGCCTATTTAGATCCTGGAAACATGGAAACTGATCTTCAAGCTGGATCAAACCATAGATATGAGCTGCTCTGGGTGATACTCATTGGATTGATCTTTGCACTCATAATTCAGTCACTAGCTGCTAATCTTGGCGTCACCACTGTGATTGGAACGGCTTTTGCGCTAAATATTCTATTCAAGATCCCCCTTTGGATTGGTGTTATACTCACAGGCTTCAGCACTCTCGTGCTTCTTGGCCTGCAGAGATACGGGGTTAGGAAGCTAGAATTGGTTGTTTCAGTACTAGTTTTTATAATGGCGGGATGTTTCTTTGGGGAACTGAGTTATGTAGATCCCCCTGCTTCTGAAGTGTTGAAGGGCATGTTTGTGCCAAAGCTTAAAGGTCAAAGTGCCACTGGTGATGCCATTGCACTTCTTGGTGCCCTCATCATGCCGCATAACTTATTCCTCCACTCAGCCTTAGTACTTTCTAGGAAAGTCCCTCCTTCAGTTCGTGGCATAAACGACGCATGTAGATATTTCCTCATAGAGAGTGGAATGGCACTTTTTGTAGCATTTTTAATCAACGTTTCGATGATCTCGGTCACTGGTACTATTTGCTATGCCAGCAATCTTTCCAGTGAAAATTTAGACAGATGCAGTGATCTAAGTCTGGATTCTGCTTCTTTCCTCTTAGAGAATGTGTTGGGAAAATCTGCAAAATACATTTATGCAATAGCACTGTTAGCCTCAGGGCAAAGCTCTGCTATTACCGGCACATATGCTGGGCAGTACATCATGCAGGGCTTCCTGGATCTTAGGATGAAAAAATGGCAAAGGAATTTGATGACTAGAATCATTGCCATAGCACCGAGTCTTGTTGTAGCCATTATCGGAGGATCTAAGGGATCTGGGAGGCTCATCGTCATTGCATCGATGATACTTTCATTTGAGCTTCCTTTTTCTTTGATTCCACTTCTCAAATTCAGCAGCAGTAGCAGTAAAATGGGACCTCACAAGAATTCTATAATTATTATTATCGTCTCGTGGATACTAGGGTTTGGAATCATTGGTATAAATGTGTACTACCTTAGTACTGCCTTTGTGGATTGGCTAATCCACAGTACTCTACCAAAGGTTGCCAATGTCCTTATCAGCATAGTAGTGTTTCCTTTGATGGCAATCTATGGTGTTTCAGTCATTTACTTGACTATAAGAAAAGACAAGGCTGTTACATTTATAGATCCAACTCAAACGCAAATGGAAAAGGGGCTTGCTGGTTCAGGAAGAACTACTGAAATGACTCCTATACCTTACAGAGAGGATTTAGCAGACATCCCACTACCTGAATGA 1509 0.4235 MGSLQQQQQNGIDMGSKRIAAVNVTSPYITGPNDLHSDQEKPAWKKFLSFVGPGFLVSMAYLDPGNMETDLQAGSNHRYELLWVILIGLIFALIIQSLAANLGVTTVIGTAFALNILFKIPLWIGVILTGFSTLVLLGLQRYGVRKLELVVSVLVFIMAGCFFGELSYVDPPASEVLKGMFVPKLKGQSATGDAIALLGALIMPHNLFLHSALVLSRKVPPSVRGINDACRYFLIESGMALFVAFLINVSMISVTGTICYASNLSSENLDRCSDLSLDSASFLLENVLGKSAKYIYAIALLASGQSSAITGTYAGQYIMQGFLDLRMKKWQRNLMTRIIAIAPSLVVAIIGGSKGSGRLIVIASMILSFELPFSLIPLLKFSSSSSKMGPHKNSIIIIIVSWILGFGIIGINVYYLSTAFVDWLIHSTLPKVANVLISIVVFPLMAIYGVSVIYLTIRKDKAVTFIDPTQTQMEKGLAGSGRTTEMTPIPYREDLADIPLPE* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01003 502 PRINTS Natural resistance-associated macrophage protein signature 144 165 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte8g01003 502 PRINTS Natural resistance-associated macrophage protein signature 119 138 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte8g01003 502 PRINTS Natural resistance-associated macrophage protein signature 364 383 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte8g01003 502 PRINTS Natural resistance-associated macrophage protein signature 194 217 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte8g01003 502 PRINTS Natural resistance-associated macrophage protein signature 304 323 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte8g01003 502 PRINTS Natural resistance-associated macrophage protein signature 91 117 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte8g01003 502 PRINTS Natural resistance-associated macrophage protein signature 332 349 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte8g01003 502 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 105 461 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte8g01003 502 Pfam Natural resistance-associated macrophage protein 105 394 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte8g01003 502 NCBIfam Nramp family divalent metal transporter 103 383 - -
Pte8g01003 502 Hamap Divalent metal cation transporter MntH [mntH]. 32 420 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01003 Pte-Chr8 34043125 34046583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01003 40 502 Inorganic Solute Cotransporters AT1G15960 56.287 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01003 K21398 - gmx:100787785 737.258