Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01002 ATGTCAACTCAGAATCGCCGTTCTTCTTATTCATCGTCAACATCTTCATCGTTGGCCAAACGGCATGCTTCTTCAACGGAAAACATGGTACAATTTGTGGCTTCGTCTTCTCACGTTGCCAAGAAACGAGCACCTCTGGGTAACATCACTAATCAGAAGAATGCCGCTTCGAACGTTGCTGCAAAGAATCAACTTGCTCCATCATCGGCATTGATACCCTGTGCAACTAAAGCGGCCAAGACAAAGAAGGGACCTGCTGCATGTGCTAGTACTACAGGAAACTCCAGGAACAATTTTCCCACAGCGTTCAACGTTAAATCAAGTTCAGTTCCTCCTTATAACACTACCTCTTTCCCCTTGAAAGATGAAGCTGTCCAATGTTTTCCTGCTTCTGGCAGCATGGATATTTCTCCTCGTAAATCAGATGAAATGTCAGTTTCCATGGATGAGACTATGTCTACCTGTGATTCTTTCAGGAGTCCTGATGTTGAATACATTGACAGTAATGATATTGCGTCTGTTGATTACATTGATAGGAAGACATTCAGCAATCTGAATATCTCAGATAATTCAAATGAAACAGCAGCAAACACTTGTAACAGGGAGATACTTGTTGAGATGGAAATTGACAACAATATTGTTAATGTTGATACCAACTATAAGGATCCTCAATTTTGCACCATCTATGCTTGTGATATCTACAAGCACTTGCGTGCTTCAGAGGCAAAGAAAAGGCCAGCCATAGATTTCATGGAAAGAATTCAGAAGGACATAAATGCCAGCATGCGTGCCATACTGATTGATTGGCTTGTAGAGGTAGCTGAAGAGTATAGGCTTGTTCCTGATACTTTATATTTGACTGTGAACTACATAGATCGGTATCTATCAGAAAATTCTGTGAATCGACAAAGATTGCAATTGGTTGGTGTTGCCTGCATGATGATTGCCTCCAAATATGAGGAGATTTGTGCACCTCAAGTGGAGGAGTTCTGTTACATCACTGATAACACGTACTTCAAGAATGAGGTTTTAGAAATGGAGTCTTCTGTTTTGAATTACTTGAAATTTGAAATGACAGCAACAACAGCTAAATGCTTCTTAAGGCGGTTTATTCGTGCAGCCCAAGGAATCCATGAGGTTCCGTCACTGCAATTGGAGTGTTTGACCAACTACGTTGCAGAACTATCTCTACTGGAGTACAGCATGCTTTGCTATCCTCCATCTCTTATAGCTGCCTCAGCAATTTTCTTGGCCAAATTTATACTTCATCCTTCAAAGAGACCATGGAATTCTACATTGCAGCATTACACTCTTTACCAGCCTTCTGATTTGTGCGCCTGTGTAAAGGAACTCCATCGTCTTTGCTGTAGCAATCATAATTCTAGTTTACCAGCAGTAAGAGAGAAATACAGTCAACATAAGTACAAGTACGTGGCCAAGAAGAGCTGTCCTCCATCCATACCTCCGGAATATTTCCAGAGTTGCACCCAATAG 1494 0.4137 MSTQNRRSSYSSSTSSSLAKRHASSTENMVQFVASSSHVAKKRAPLGNITNQKNAASNVAAKNQLAPSSALIPCATKAAKTKKGPAACASTTGNSRNNFPTAFNVKSSSVPPYNTTSFPLKDEAVQCFPASGSMDISPRKSDEMSVSMDETMSTCDSFRSPDVEYIDSNDIASVDYIDRKTFSNLNISDNSNETAANTCNREILVEMEIDNNIVNVDTNYKDPQFCTIYACDIYKHLRASEAKKRPAIDFMERIQKDINASMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSENSVNRQRLQLVGVACMMIASKYEEICAPQVEEFCYITDNTYFKNEVLEMESSVLNYLKFEMTATTAKCFLRRFIRAAQGIHEVPSLQLECLTNYVAELSLLEYSMLCYPPSLIAASAIFLAKFILHPSKRPWNSTLQHYTLYQPSDLCACVKELHRLCCSNHNSSLPAVREKYSQHKYKYVAKKSCPPSIPPEYFQSCTQ* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01002 497 SUPERFAMILY Cyclin-like 221 358 IPR036915 -
Pte8g01002 497 CDD CYCLIN_AtCycA-like_rpt2 362 475 - -
Pte8g01002 497 Gene3D - 232 480 - -
Pte8g01002 497 FunFam Mitotic cyclin 6 246 346 - -
Pte8g01002 497 SMART cyclin_7 365 453 IPR013763 -
Pte8g01002 497 SMART cyclin_7 268 352 IPR013763 -
Pte8g01002 497 FunFam Cyclin A1 348 480 - -
Pte8g01002 497 PIRSF Cyclin_A_B_D_E 1 492 IPR046965 GO:0016538|GO:0044772
Pte8g01002 497 PANTHER CYCLINS 180 476 IPR039361 -
Pte8g01002 497 Pfam Cyclin, C-terminal domain 362 482 IPR004367 -
Pte8g01002 497 CDD CYCLIN_AtCycA_like_rpt1 222 357 - -
Pte8g01002 497 SUPERFAMILY Cyclin-like 362 486 IPR036915 -
Pte8g01002 497 Gene3D - 246 359 - -
Pte8g01002 497 Pfam Cyclin, N-terminal domain 232 358 IPR006671 -
Pte8g01002 497 SMART Cyclin_C_2 361 484 IPR004367 -
Pte8g01002 497 MobiDBLite consensus disorder prediction 1 25 - -
Pte8g01002 497 ProSitePatterns Cyclins signature. 263 294 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01002 Pte-Chr8 34030604 34033551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01002 4 492 Core Cell Cycle Gene Families AT1G44110 60.976 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01002 K06627 - qsa:O6P43_019780 698.353