Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00991 ATGATTCAGGGTGCGTTAGCTGGTGAAGGAAGTAAGTCCGGCAACCGGACGGCGGTAGTGGGAGTCAAGTTGGATACTCAGAGTAAAGAGTTGCTTACCTGGACATTAGTTAAAGTTGCTCGGCCTGGTGATGTTGTTCTTGCTCTCCATGTTCTCGATAAAAATGAAATTGTGGATGGGGATGGCAAATCTTCGCTTCTCTCACTTGTCAAAGGATTTGACTCTATTCTTGCTGTCTACGATGGATTCTGCAACTTGAAACAGGTGCAACTCAAGCTTAAAATTTGCAGAGGTTCTTCAGTTCGGAAAATATTAGTTCGAGAAGTTAAAGCGTATTCTGCAACTCATATTATTATTGGAACTGCTGTAGGCCGCCACAAAATTCGATCATCTGCATCTGTTGCCAAGTATTGTGCTAACAGTTTATCCAAGGATTGTTGGGTTCTTGCTGTCAATAATGGAAAAGTTGTCTTTAAGCGAGATGGCTCACCCGAACATGTTGCCGACCTACAAAGTGATGTAGATGAGGACAACTCTATTGCTATAGTGCCAGTTTCTCCGGTAGAAACAGCTTCAAATTCAACTTCAATGTCAATCATAGCCATTCCGGAATCAAAACCTGGTTGGCCTCTTCTACGGCACACAATTTCATCAAAACACCAGGCTTCTGACTGGTCATTGTTGAGGCAGCTATCAGTAGTTCAGTGGGCAATGCGGTTGCCCTGTAGAGATCTTTCATGGACTGCAGAGTCTATTAACAAACAATATGGTTATGATGAGAGTCAGGAACCAAGCAGTGGTGTAGATTGTGAAAGCAGTGCTATAGTTCTGATGGATGCTGGGATAGGGACTACCCCACCTTTCACAGAACTCTGTCTGAAAAGAATTCCAAAAGAACTGGAAGAGCTTTGTGAGAAATATTCTTGTTCATGCAGATTATTTAGCTATCAAGACCTTGTAGTGGCCACATCAAATTTCTTGCCAGAAAACTTGATAGGAAAAGGTGGGAGTAGCCACGTATACAGAGGTTGCCTTTCCGATGAGAAGGAGCTCGCTGTGAAAATCTTAAAGCCTTCAGAGAATGTTTTAAAGGAGTTTCTCTTGGAAATAGAAATTATCACTACTTTAAATCAAAAAAATATCATTTCACTCATTGGCTTCTGTTTCGAGGATGGACATCTTCTGTTGGTGTATGATCTGTTGTCAAGGGGAAGCCTTGAAGAGAACCTTCATGGTTCAAGAAAAGATCCTCTTGCATTTGGATGGACAGAGAGATTTAGAGTGGCACTAGGTGTAGCAGATGCTTTAGATTATCTGCACAACAATGTTCAACCTGTGATTCACAGGGATGTCAAATCATCAAATGTATTATTATCAGATGATTTTGAACCTCAGCTTTCTGATTTTGGACTGGCTACATGGGCATCAGCTACTTCCTCTCATATAACTTGTACTGATGTTGCTGGGACATTCGGTTACCTGGCACCTGAATACTTCATGTATGGAAAAGTGAATGAAAAAATTGATGTCTTTTCATTTGGTGTGGTGCTCCTAGAGCTACTCTCTGGGAAAAAACCAATAAGCTGTGATTTGCCTAAAGGCAGGGAGAGCCTAGTCATGTGGGCAACCCCAATTCTAAATAGTGGAAAAGTATCTCAATTATTAGATCCAAGCTTGGATAACAAGTATGATCAGGACCAGATGGAGAGAATGGCCCTGACAGCTACTCTTTGTGTCAGACGTGCACCACGAGCCAGGCCTCAAATGAGCACAGTTTTAAAGCTCCTTCAAGGTGATAATGATGTGCTCAAGTGGGCAAGGCTAGAAGTTAATGCTTCTGTGACCCCATATTCCCTTGACGATGAGACTACCCTTGGTTCTAACCTTCAATCACATCTTAACCTTGCTCTGCTTGATGTGGAGGATGACTCACTCTCAATGAGCAGCATGGAGCAGAATGTGTCCTTGGAGGATTATTTGAGAGGCAGGTGGAGCCGATCTTCAAGCTTTGACTAA 2016 0.4246 MIQGALAGEGSKSGNRTAVVGVKLDTQSKELLTWTLVKVARPGDVVLALHVLDKNEIVDGDGKSSLLSLVKGFDSILAVYDGFCNLKQVQLKLKICRGSSVRKILVREVKAYSATHIIIGTAVGRHKIRSSASVAKYCANSLSKDCWVLAVNNGKVVFKRDGSPEHVADLQSDVDEDNSIAIVPVSPVETASNSTSMSIIAIPESKPGWPLLRHTISSKHQASDWSLLRQLSVVQWAMRLPCRDLSWTAESINKQYGYDESQEPSSGVDCESSAIVLMDAGIGTTPPFTELCLKRIPKELEELCEKYSCSCRLFSYQDLVVATSNFLPENLIGKGGSSHVYRGCLSDEKELAVKILKPSENVLKEFLLEIEIITTLNQKNIISLIGFCFEDGHLLLVYDLLSRGSLEENLHGSRKDPLAFGWTERFRVALGVADALDYLHNNVQPVIHRDVKSSNVLLSDDFEPQLSDFGLATWASATSSHITCTDVAGTFGYLAPEYFMYGKVNEKIDVFSFGVVLLELLSGKKPISCDLPKGRESLVMWATPILNSGKVSQLLDPSLDNKYDQDQMERMALTATLCVRRAPRARPQMSTVLKLLQGDNDVLKWARLEVNASVTPYSLDDETTLGSNLQSHLNLALLDVEDDSLSMSSMEQNVSLEDYLRGRWSRSSSFD* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00991 671 PANTHER OS08G0249100 PROTEIN 78 604 IPR046958 -
Pte8g00991 671 FunFam Putative receptor-like serine/threonine-protein kinase 401 612 - -
Pte8g00991 671 CDD USP_Like 19 148 - -
Pte8g00991 671 Gene3D Phosphorylase Kinase; domain 1 292 400 - -
Pte8g00991 671 Gene3D HUPs 16 153 IPR014729 -
Pte8g00991 671 Pfam Universal stress protein family 15 148 IPR006016 -
Pte8g00991 671 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 295 400 - -
Pte8g00991 671 Gene3D Transferase(Phosphotransferase) domain 1 401 610 - -
Pte8g00991 671 Pfam Protein kinase domain 330 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00991 671 SMART serkin_6 326 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00991 671 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Pte8g00991 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Pte8g00991 671 ProSiteProfiles Protein kinase domain profile. 326 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00991 671 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 15 152 - -
Pte8g00991 671 SUPERFAMILY Protein kinase-like (PK-like) 307 604 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00991 Pte-Chr8 33949995 33954208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00991 314 602 Trihelix Transcription Factor Family AT1G70460 44.068 5.72e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pte8g00991 Pkinase 2.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00991 - - gmx:100305405 862.062