Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00979 ATGTCATTAGTTAGGCCTGCAGAGTTAGCCACTACATCATATGGGAATGCTAAGCTTTACTCTCTAAAGAGAACTGATGGATGCGCTGGCTTGTCCTCTCAGATGTTTGAATCTGGAAAGCACAGGGCCATGTGTACAACAGATTCCTACTGCAGTGAGAGTTTCGAGAAGTTCTTCCATGACTCACCAACAGAAGAGTTAGCACAACTTTCTAGTTCTATCATATCAGCCAATACCTTTGACCCTGAGGTTGACTCCTACAGACTTAGAGCTGGCTCAAATAACATTGCTCAAAATCCACTTGAGATTACTATAAGACATCATAATGCGTATCAAAGTAACTCTGAATCTGATTATCTGAATATTCATAGTCCCGATCTGCTGGATTTCGATGATCAGACAAGATTGAAGCTTCAAGAACTGGAAAGAGAACTGCTTGAGGATAATGATAATGAAGATGATGAGGATGAAATATTTGAGGCTGGTCAGGTAATGGACATTGATGGTGAATGGGCTGCTCAGAATGCACATCTCCATGATTCACCGAAGGAATCCTCATCTTCAGATTCCAACCATAGTAGCATCAGTATCAACAAAGAAATTTCACAATTCGCTCCTCAGACTCCCAAACAATTGCTATTTGACTGTGCTGCTGCGCTTTCTGAGGGACACGTGGAGGAAGCATCCTCAATGATAAATGAACTTAGGCACATGGTCTCAGTACATGGTGACCCTTCTTCAAGGATTGCAGCCTACATGGTGGAAGGTCTTGCTGCTCGCATGGCACTGTCTGGAAAATTTCTCTACAAGGCTCTCAGGTGCAAAGAACCTCCATCTTCAGACCGTCTAGCAGCGATGCAAATACTGTTTGAGGTGTGCCCTTGTTTCAAGTTTGGATATGTTGCAGCAAACAGTGCAATCCTAGAGGCAGTTATAGATGAAAAGAGGGTTCATATAGTTGATTTCGACATAAACCAAGGAACCCAATACATAGCATTGATGCAAGCACTCGCGACAAGACCAGGTAAGCGGCCTCACTTGAGATTAACTGGAGTGGATGATCCTGAATCTGTTCAACGTTCTGTTGGAGGTTTGAAAATCATAGGACAGAGGCTCGAAAAGCTTGCAGAAGCGTTGGGGTTGCCGTTTGAATTTCAGGCTCTGCCGTCAGTGACTTCACTTGTCAAACCAGCAATGCTCGACTGTCGTCCTGGGGAAGCCCTTATTGTAAACTTTGCTTTCCAGCTTCATCATATGCCAGATGAGAGCGTTTCAACAGTAAACGAAAGAGACCAACTTCTCAGAATGGTGAAGAGCCTGAAGCCAAAACTTGTCACTGTTGTGGAACAAGAAGTGAACACTAACACAACACCTTTCTTTCCAAGATTTGTTGAAGCATATAATTACTATTCTACAGTGTTTGAATCATTGGATGCAACTCTTCCAAGAGAAAGTCAGGATAGGGTGAATGTGGAAAGGCAGTGCCTGGCCAGGGACATTGTTAACATTGTTGCATGTGAAGGGGAGGAGAGAATAGAAAGGTACGAAGTTGCAGGAAAGTGGAGAGCAAGAATGGTAATGGCCGGCTTCATTTCATGTCCAATGGGGCCAAACGTGATTGATGTAATAAGGAAACTCATAAAGCAGTATTGTGATAGGTATAAAGTGAACGAGGAGATGGGAAGTCTTTATTTTGGATGGGAAGATAAGAACTTGATTGTTGCATCAGCATGGAGGTGA 1740 0.4322 MSLVRPAELATTSYGNAKLYSLKRTDGCAGLSSQMFESGKHRAMCTTDSYCSESFEKFFHDSPTEELAQLSSSIISANTFDPEVDSYRLRAGSNNIAQNPLEITIRHHNAYQSNSESDYLNIHSPDLLDFDDQTRLKLQELERELLEDNDNEDDEDEIFEAGQVMDIDGEWAAQNAHLHDSPKESSSSDSNHSSISINKEISQFAPQTPKQLLFDCAAALSEGHVEEASSMINELRHMVSVHGDPSSRIAAYMVEGLAARMALSGKFLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGYVAANSAILEAVIDEKRVHIVDFDINQGTQYIALMQALATRPGKRPHLRLTGVDDPESVQRSVGGLKIIGQRLEKLAEALGLPFEFQALPSVTSLVKPAMLDCRPGEALIVNFAFQLHHMPDESVSTVNERDQLLRMVKSLKPKLVTVVEQEVNTNTTPFFPRFVEAYNYYSTVFESLDATLPRESQDRVNVERQCLARDIVNIVACEGEERIERYEVAGKWRARMVMAGFISCPMGPNVIDVIRKLIKQYCDRYKVNEEMGSLYFGWEDKNLIVASAWR* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00979 579 Pfam GRAS domain family 210 579 IPR005202 -
Pte8g00979 579 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 182 574 IPR005202 -
Pte8g00979 579 Coils Coil 138 158 - -
Pte8g00979 579 ProSiteProfiles GRAS family profile. 200 579 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00979 Pte-Chr8 33863013 33867418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00979 1 580 GRAS Transcription Factor Family AT1G21450 61.616 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte8g00979 GRAS 1.4e-134 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00979 - - cave:132184486 821.231