Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00966 ATGTCGAGCACAGCTGGTCAGGTCATCAAATGCAAAGCTGCCGTGGCATGGGAGGCAGGCAAACCTCTGGTAATTGAAGAAGTTGAAGTAGCCCCACCCCAGAAAAATGAAGTGCGAGTGAAGATCCTCTTCACATCTCTGTGTCACACTGATGTTTACTTCTGGGAAGCGAAGGGACAGAACCCATTGTTTCCTCGTATCTTAGGTCACGAGGCTGGAGGGATTGTGGAGAGCATAGGTGAGGGAGTGACTGATCTTCAACCAGGTGATCATGTTCTCCCTGTTTTCACTGGGGAATGCAAGGAATGCCGCCACTGTAAATCCGAGGAGAGCAACATGTGTGACCTACTTAGAATCAACACTGATAGGGGTGTGATGCTCAATGACGGTCAGACAAGGTTCTCTAAAAATGGAAAGCCAATCTACCACTTCGTCGGTACCTCCACATTTAGCGAATACACAGTTGTCCATGTTGGATGTCTCGCAAAGATTAACCCTGCTGCCCCACTAGACAAAGTTTGTGTCCTAAGTTGTGGAATATCCACAGGTTTTGGTGCCACTGTGAATGTTGCAAGGCCCAAAAAGGGTTCTTCTGTTGCGATTTTTGGGCTGGGAGCGGTTGGTCTTGCTGCTGCAGAAGGCGCAAGGGTGTCTGGTGCTTCAAGAATCATTGGGGTTGATTTGAATTCCAATCGATTCGAAGAAGCTAAGAAGTTCGGAATCAATGAGTTCGTGAATCCGAAGGATCATGACAAACCTGTTCAGCAGGTAATTGCTGATATGACTGATGGAGGGGTGGACCGTGCGGTTGAATGCACTGGAAGCATCCAGGCTATGATCTCAGCTTTTGAATGCGTCCATGATGGTTGGGGTGTTGCTGTACTTGTTGGCGTGCCGAATAAAGATGATGCATTCAAGACTCACCCCATGAATGTCTTGAATGAAAGGACTCTTAAAGGAACCTTCTTTGGGAACTACAAACCTCGCACTGATATTCCAGGAGTTGTGGAGAAGTACATGAATAAGGAGATGGAGTTGGATAAGTTCATCACTCACACTCTTCCATTCTCAGAGATCAACACAGCATTTGACTACATGATGCAAGGGAAATCAATTCGATGCATGATCCGTATGGAAGAATAA 1143 0.4663 MSSTAGQVIKCKAAVAWEAGKPLVIEEVEVAPPQKNEVRVKILFTSLCHTDVYFWEAKGQNPLFPRILGHEAGGIVESIGEGVTDLQPGDHVLPVFTGECKECRHCKSEESNMCDLLRINTDRGVMLNDGQTRFSKNGKPIYHFVGTSTFSEYTVVHVGCLAKINPAAPLDKVCVLSCGISTGFGATVNVARPKKGSSVAIFGLGAVGLAAAEGARVSGASRIIGVDLNSNRFEEAKKFGINEFVNPKDHDKPVQQVIADMTDGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNVLNERTLKGTFFGNYKPRTDIPGVVEKYMNKEMELDKFITHTLPFSEINTAFDYMMQGKSIRCMIRMEE* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00966 380 Pfam Alcohol dehydrogenase GroES-like domain 36 161 IPR013154 -
Pte8g00966 380 FunFam Alcohol dehydrogenase class-P 183 321 - -
Pte8g00966 380 Pfam Zinc-binding dehydrogenase 206 332 IPR013149 -
Pte8g00966 380 Gene3D - 19 370 - -
Pte8g00966 380 SUPERFAMILY GroES-like 328 376 IPR011032 -
Pte8g00966 380 CDD alcohol_DH_plants 9 377 - -
Pte8g00966 380 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
Pte8g00966 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 342 IPR036291 -
Pte8g00966 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Pte8g00966 380 Gene3D - 183 321 - -
Pte8g00966 380 SUPERFAMILY GroES-like 4 185 IPR011032 -
Pte8g00966 380 PANTHER ALCOHOL DEHYDROGENASE 6 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00966 Pte-Chr8 33690418 33693454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00966 1 368 Monolignol Biosynthesis Gene Families AT1G72680 24.397 4.11e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00966 K18857 - cave:132183965 718.768