Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte8g00951 | ATGTTTACAACAACAGATAGGGGGCATGACCAAATATTGCAGCACCCCACTAAGCCATTTGTGATGATGGATAGAAGGTGGAAGCCTAATATTGAGATAGCTCCCAATTGTCCTCGTTGTGCATCTGCCAACACCAAATTTTGTTACTACAACAACTATAGCTTGTCACAACCAAGATATTTCTGTAAGGGGTGTAGGAGGTATTGGACTAAAGGCGGTTCTCTACGGAACGTGCCTGTTGGTGGTGGTTGCCGTAAGAGCCGCCGTGGGAGATTGGCAAGGAGTGGACAAAATCAAAGGGTTTCCGGCAATGGGTTCAATTCTAAGCGATCTGCGGTTCCTAACGGAGAGTCATTGCTTGCAGAAGAAGCAAATGAAACTACTGAGATTGATCTGGCAGCTGTTTTTGCCAGATTCTTGAACCAAAATCCAAGTTCTGTCGAAGAATTTGACAGCGAGCCACATGGGTCGTCATCAAACTTCTCAAATTCTCTTACACCAGAGAGTTTTGAGAATGAGATCAGTGACACCGTTCTTGATTGTCAGAAGCAGTCTGATCCTAACCTACTCATGGAGTACGATTTGCCAGTACAAGAATTTCTCCAAGATGAGAAGATTGATAATTTTGTGGTGTCAGATGATGGTTTATACACAATTGATCAGCTGCAGGATTTGTTGCGTGGTGATGAGTTGGTCCAAGATGTTCTTTTGTATGAGTCCGATACAGCAGCATCCTCATGTGGAAACTTCACATGGCAGCCATCACCATCATTACAGCAGGTGCCAGTTCCAGCGATTCAATTGCAACAAGAGATGGAGTACTTATTGCCAATCAATCATGAAGATGATTACAACTCTCACGTTCATTCTACAATGAGCATGTTGAACGATAATTGGGGTTCCTTCGATCTCTCAACCTTTTGA | 924 | 0.4351 | MFTTTDRGHDQILQHPTKPFVMMDRRWKPNIEIAPNCPRCASANTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRGRLARSGQNQRVSGNGFNSKRSAVPNGESLLAEEANETTEIDLAAVFARFLNQNPSSVEEFDSEPHGSSSNFSNSLTPESFENEISDTVLDCQKQSDPNLLMEYDLPVQEFLQDEKIDNFVVSDDGLYTIDQLQDLLRGDELVQDVLLYESDTAASSCGNFTWQPSPSLQQVPVPAIQLQQEMEYLLPINHEDDYNSHVHSTMSMLNDNWGSFDLSTF* | 308 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte8g00951 | 307 | ProSiteProfiles | Zinc finger Dof-type profile. | 35 | 89 | IPR003851 | GO:0003677|GO:0006355 | |
Pte8g00951 | 307 | MobiDBLite | consensus disorder prediction | 86 | 113 | - | - | |
Pte8g00951 | 307 | MobiDBLite | consensus disorder prediction | 146 | 167 | - | - | |
Pte8g00951 | 307 | ProSitePatterns | Zinc finger Dof-type signature. | 37 | 73 | IPR003851 | GO:0003677|GO:0006355 | |
Pte8g00951 | 307 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 26 | 165 | IPR045174 | GO:0003700|GO:0006355 | |
Pte8g00951 | 307 | Pfam | Dof domain, zinc finger | 35 | 89 | IPR003851 | GO:0003677|GO:0006355 | |
Pte8g00951 | 307 | MobiDBLite | consensus disorder prediction | 94 | 113 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte8g00951 | Pte-Chr8 | 33601389 | 33602312 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte8g00951 | 27 | 144 | C2C2-Dof Transcription Factor Family | AT3G52440 | 60.656 | 2.66e-42 | 145 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Pte8g00951 | zf-Dof | 1.2e-31 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte8g00951 | - | - | qsa:O6P43_015057 | 243.047 |