Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00944 ATGAGAGAGAGTATAATGGAACAAGGCATCCTACGCTCTCCAAAATACACTGTCCATAAAATTGTAATGAAGAAGCACACCAAGCCATCACAAGCTACTAAGAAGATTTCTGAACCCAGGGTTGTAAGGATTTCTGTGACTGACCCATATGCCACCGACTCATCCAGTGATGAAGATACTCAATGCCATCCACGACAGAGAGTGAAGAGGTTTGTGAATCAGATTGAGATAGAGATGGGTACGAAGAGTATTATTCCGGTTCCCAATGGTAAAAAGAGACCTGCCAGAGAAACCGCCTCGTGCCGACGGCCGCAGAAAGTTCAACCAACGACAACTTCAACGAACGGTGGAAGCAGAAAGTTCCGTGGAGTAAGACAAAGGCCGTGGGGGAAATGGGCGGCTGAGATTAGAGATCCTGCTCGTCGTGTCCGGTTGTGGTTAGGTACCTTTGATACAGCAGAAGAAGCAGCTATGGTGTATGACAATGCAGCTATTAAGCTCAGAGGCCCTGACGCCTTAACAAACTTTGTTACCCCACCTTTGAGAGAGCAGCCTGCAGTGGAGGTTGTTGATAAGCCCGAAGAAATCCATTTGGTTGTGAAGTCAGAAGCTTCCGGTTCTGGTTACGAGTCTGCAGACGAATCCACTCATAATCTTTCATCTCCTACTTCAGTCCTTCGTTTCAGAACCCATGTCAGTGAAGAACCAGAACTGCTAAAACCGATTGAACCAGTGTGCGCACAGTACTCTTCTTCCCCTGCAGTGGCTCACGAATCCGAGCAAGTTGACGAGCTGTTCTGGGAGTGTCAAGGAGAGGCCAGTCTCTGCGATGAAAGTGAAGACTATTTCCGACTTGAGATGCCAGTTTTGGATGATTTGTTCAATTTCTCAACCCCGGAAAACCCAATGCTTTTTGAAGAACCACCGCTCCTTCTGCTTGGTGAAACATCAAACATGTTGCCTGACGAAGATTTCAATGACATACTTGCAGACTCAACGATAGGCCTAGATGTGGAGCCTTACTCGCCATCCACGCTGCGCCAGGTGGATGATTACTTTCAAGACCTTTTGTTCACTTCAGACCCTCTAGTGGCTCTGTGA 1101 0.4741 MRESIMEQGILRSPKYTVHKIVMKKHTKPSQATKKISEPRVVRISVTDPYATDSSSDEDTQCHPRQRVKRFVNQIEIEMGTKSIIPVPNGKKRPARETASCRRPQKVQPTTTSTNGGSRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTFDTAEEAAMVYDNAAIKLRGPDALTNFVTPPLREQPAVEVVDKPEEIHLVVKSEASGSGYESADESTHNLSSPTSVLRFRTHVSEEPELLKPIEPVCAQYSSSPAVAHESEQVDELFWECQGEASLCDESEDYFRLEMPVLDDLFNFSTPENPMLFEEPPLLLLGETSNMLPDEDFNDILADSTIGLDVEPYSPSTLRQVDDYFQDLLFTSDPLVAL* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00944 366 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
Pte8g00944 366 PRINTS Ethylene responsive element binding protein signature 121 132 IPR001471 GO:0003700|GO:0006355
Pte8g00944 366 MobiDBLite consensus disorder prediction 84 124 - -
Pte8g00944 366 MobiDBLite consensus disorder prediction 26 64 - -
Pte8g00944 366 SMART rav1_2 120 183 IPR001471 GO:0003700|GO:0006355
Pte8g00944 366 Pfam AP2 domain 120 169 IPR001471 GO:0003700|GO:0006355
Pte8g00944 366 Gene3D AP2/ERF domain 119 178 IPR036955 GO:0003700|GO:0006355
Pte8g00944 366 CDD AP2 120 176 IPR001471 GO:0003700|GO:0006355
Pte8g00944 366 ProSiteProfiles AP2/ERF domain profile. 120 177 IPR001471 GO:0003700|GO:0006355
Pte8g00944 366 SUPERFAMILY DNA-binding domain 120 177 IPR016177 GO:0003677
Pte8g00944 366 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 38 247 - -
Pte8g00944 366 MobiDBLite consensus disorder prediction 103 120 - -
Pte8g00944 366 FunFam Ethylene-responsive transcription factor 2 119 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00944 Pte-Chr8 33537060 33538730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00944 11 356 AP2-EREBP Transcription Factor Family AT4G27950 43.662 1.16e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte8g00944 AP2 9.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00944 - - qsa:O6P43_015048 371.318