Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00938 ATGGGACGATGTTTACTGTTTTGTAATTGCAGAGCTTATTACAGATGCATACATAAAGATGTCCGAGGTTGTCTGGCCACAAAGCAAGTACAAAGGTCTGATGAAGATCAAACTATCTTTGAAATCACTTACCGTGGAAGACATATTTGCGCTCACCCCTCCAATATGAACCATCCTCCTACCTCTGTCGAAAACCATGAAACAGCTAACGTAGACATTTTTCAACAGCAACAAGAAAATGTAATGCAGCACCAACAGCCATCACAAGAAATGTTGTTGAGTTTCAGAGACGCCCTCAGAGTTCAAACAGAGAATTTGGATTCCAATTACCAGACAGCACCTTCATTCTATTTCCCTACAGATTTCCAGGACGATATCCCAGTATTCTCCCCTACTATGAATGAAACTAATTTTGGTGGGGAATTTTCTCATTCTTATTTGTCTCCTGCAACATCTTCGGTAAACCACTTCTCTATGGCACCAAATGGGATGAATAACTTCGGAGGAAATAATTACAGTCTGCCAAGTTCAGAGTCTGAAATCAACGACATTATCTCAGCTGCTACATCGGCAGCAAACTCTCCGACCGTTGGCATAAATTATCCATTTGGACATGTTGAATTTGAACCAAACTTCTCATTCAACAAGCCAGGTTTCTTTTCTTGA 666 0.4054 MGRCLLFCNCRAYYRCIHKDVRGCLATKQVQRSDEDQTIFEITYRGRHICAHPSNMNHPPTSVENHETANVDIFQQQQENVMQHQQPSQEMLLSFRDALRVQTENLDSNYQTAPSFYFPTDFQDDIPVFSPTMNETNFGGEFSHSYLSPATSSVNHFSMAPNGMNNFGGNNYSLPSSESEINDIISAATSAANSPTVGINYPFGHVEFEPNFSFNKPGFFS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00938 221 SUPERFAMILY WRKY DNA-binding domain 9 53 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte8g00938 221 SMART WRKY_cls 9 52 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte8g00938 221 Pfam WRKY DNA -binding domain 10 50 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte8g00938 221 Gene3D WRKY domain 7 54 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte8g00938 221 ProSiteProfiles WRKY domain profile. 11 53 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte8g00938 221 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 11 115 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00938 Pte-Chr8 33496505 33497625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00938 11 157 WRKY Transcription Factor Family AT4G23810 36.054 2.01e-19 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte8g00938 WRKY 2.2e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00938 - - cave:132167134 231.491