Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00932 ATGACGATGAATCAAGCAATGGTGTCTCAAAAGTCACTTGGCTGCAAGCAAAAAGTGCGGCCTGTTTCAAAAGTAAAGTCAGATGAAAATGATGCTGGGCAATGCTCCTTGAACCTGAATGACAACACAACAAATAAATCTGCTTCGCCAAGTTATAACTTATGGATGGTAAAGCACCCATGTGCACTACGATCTTTTGATAGAATGATGAAGGCAGCAAAGGGAAAGAGACTCGTTGTGTTTTTGGATTATGATGGCACTCTATCACCTATTGTAAATGACCCCGATCGAGCATTCATGTCTGATGAGATGCGTGGTGCAGTTCGTGAAGTTGCCAAATATTTTCCGACAGCGATAATTAGCGGAAGACGTCGTGGCAAGGTGAAAGAATTTGTGAGATTAAACAATGTGTATTACGCTGGGAGCCATGGGATGGACATAATGGTCCCAGCAATGCCGCTGAAGTCTTGTTATGGGAAGCAACAGACTTCAAACCCCAACAAGAAGGGACGGGAGTTGATCTTTCAACCTGCAAAGAAATTTCTGCCTGCAATTGAAGAGATGTTTACAATCTTGAAGGGAAAACTCTCTTCAATACAAGGTGCAAAGATAGAAGACAATGGGTTCTGTATATCTGTGCATTACCGGCATGTGCTAGAAGAGGATTATGAAGTATTGGAAAAGATAGTAAAGTCTGTGATTAGCAATCATCAAGAGTTCCACTTAACCGAAGGCAAAAAGGTCATGGAGATAAGGCCATCAATAGATTGGAACAAAGGGCATGCCCTAGAATATTTTCTTAGCACCCTAGGGCTCAACAATTCCAACGATGTTCTTCCACTTTACATTGGAGATGATCGAACAGATGAAGATGCATTCAAGGTAATACAAAGCAGGGGGCAGGGTTATTCCATTGTAGTATCCTCAACCCCAAAGGATACAAAAGGTACATACTCTCTGTATGATCCATCAGAGGTCCTGACTTTCCTGCTACGACTGACAAGGTGGAGGAAGACCTCCTCTTTGAGTAGACTACTTAACTAA 1044 0.4224 MTMNQAMVSQKSLGCKQKVRPVSKVKSDENDAGQCSLNLNDNTTNKSASPSYNLWMVKHPCALRSFDRMMKAAKGKRLVVFLDYDGTLSPIVNDPDRAFMSDEMRGAVREVAKYFPTAIISGRRRGKVKEFVRLNNVYYAGSHGMDIMVPAMPLKSCYGKQQTSNPNKKGRELIFQPAKKFLPAIEEMFTILKGKLSSIQGAKIEDNGFCISVHYRHVLEEDYEVLEKIVKSVISNHQEFHLTEGKKVMEIRPSIDWNKGHALEYFLSTLGLNNSNDVLPLYIGDDRTDEDAFKVIQSRGQGYSIVVSSTPKDTKGTYSLYDPSEVLTFLLRLTRWRKTSSLSRLLN* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00932 347 Pfam Trehalose-phosphatase 81 324 IPR003337 GO:0003824|GO:0005992
Pte8g00932 347 NCBIfam trehalose-phosphatase 76 334 IPR003337 GO:0003824|GO:0005992
Pte8g00932 347 CDD HAD_TPP 79 326 - -
Pte8g00932 347 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 23 341 IPR044651 GO:0004805|GO:0005992
Pte8g00932 347 Gene3D - 78 161 IPR023214 -
Pte8g00932 347 Gene3D - 186 344 IPR023214 -
Pte8g00932 347 NCBIfam HAD-IIB family hydrolase 80 297 IPR006379 -
Pte8g00932 347 FunFam Trehalose 6-phosphate phosphatase 178 254 - -
Pte8g00932 347 FunFam Trehalose 6-phosphate phosphatase 184 343 - -
Pte8g00932 347 SUPERFAMILY HAD-like 79 336 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00932 Pte-Chr8 33436549 33441600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00932 47 330 Trehalose Biosynthesis Gene Families AT1G70290 24.510 1.07e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00932 K01087 - cit:102629242 471.855