Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00927 ATGTATCTTCAAGGATTCACCTTACATATGCATAGACGAAAAACCCAGTCGACTTTAATTTCAGAATGCGTGGTGGCCTTCATCATCTCTGCTCTATCGATCCAGCTATTCCAATTCCACCAGGCAAGTTACGTTTCAGCCCAGACTGGTAATAGTTGTCCACCTTCATCCTGTGGCAAAATTTCTGAAATCAAATATCCTTTCCGACTCAAAGGCGACCCAGAAAGCTGCGGCGACCCCAGATATGAATTAACTTGTGAAAACAACAATAACCTGACAACAACCTTAACCTTGTCGTTGTTGTCCGGCGAGTACCATGTAGAGTCCATCAATTACAACAACTTCACAATCCGACTAGTTGACCCTGCAGTTCAACTTCTTCACCACCAAGATTCAAACTTTAGTTGTGCCTCGATTCCTCGCTACACTCTGTACCCCAACAACTTCAGCAATATTCCTGATGAGAATAATCCATACAACGTTTATCAGATGCAGGGGAGTGGTTATTATGTTGATAACGTGCGAATAGCAACTGGTATGGTCTACTTCTGGCACTGCAATTCCATCCCAGTGAGCAATACTCTGTCTGTAAACACAACGCCGTGCTCTGATTCTGATGGGTCATATTCTAGTGAGCTACTCTATGTAACCGTCAACGATTTCAACTTCGATGTGGGTTGCCAAGTCAAGCGGGTTATTTTCACATCCATGAATATTACCAATGTCTCCGGCAGCAATGTCCAGAAGGCATTAGAGTTTGGATTTGAGGTGTCGTGGTTGGATGGCGTTTGTATAAACCACTGCAGATCGCAATATTGCCACCTCCACAAATCGAACAGTAGCAGTGCGTTACAATGCGATCCATATCCGGTGGGAGTCCGATTCTGCCATTACACTGAGTGGACAACCTACCTCTGCGATGCAGGCTTCTTTACAAAGCTCAAAACTTTCATTAAAGCCCTGCTTGATGTTATAGCTAAGGTTACAACAGCGTTGTACTGGCTACTACGCTTGCAGCCTTCAAGAGCTGATTTTCCTGATCAACCAAGCCCTGAAAAATTGACCGGACAAGTTATTTTGCCATCGTATTTTGGAGCAAGATTGCTATTTGGAATTGTACTATTGACTATACTCCTAATCTACAGATGCCGAAGGAGACATTTGTCAGTGTACGAAAGTATTGAAAATTTTCTTTCCCATAATAACGATCTGATGCCTGTAAGATACTCTCACAAAGAAATCAAGAGGATGACCAGAGGTTTCAAGGACAAGTTGGGTGAAGGAGGCTATGGCTGTGTCTACAAAGGAAAGCTACGCAGTGGCCCTCTTGTTGCAGTCAAGGTGTTGACTAAATCCAAAGCCTCCACTGGTGAAGAGTTTATCAATGAAGTTGCAACCATAGGAAGGATCCACCATGTGAACGTGGTGAAACTCATTGGATTTTGTGTGGAAAGATCAAAGCGTGCTCTTGTTTATGAGTTCATGCCCAACGGTTCTCTTGATAAACACATATTCTCCAAACAAGGGCATGGTACTGATGATCTAAGTTGCGACAAAATGTATTCAATATCTCTTGGAGTGGCTAGAGGGATTGCATACCTTCATGAAGGTTGTGACATGCAGATTCTGCATTTTGATATCAAGCCTCACAACATTCTTCTGGATGAAAACTTTGTCCCAAAGGTTTCAGACTTTGGACTTGCCAGGCTCTATGCTATAGACGACAGCATTGTCTCAGTGACTGCCAGAGGAACATTGGGATATATGGCTCCTGAGTTGTACTACAAGAATATTGGTGGAGTCTCCTATAAGGCTGATGTCTATAGCTTTGGGATGCTGTTAATGGAGATGGCAAGCAGACGGAAAAATATGGATATGCGCACTGCAGAAGATGGTCTTATAAGCGGAGACAATTTGAGTCAGATGTACTTTCCTACGTGGGTTCATGATCAATTTACAGTTGGAGAAGACATAGAACTAGAAGACATTGTGACTGAGGAAGAAAAGATCGTAGCGACAAAAATGATAATGGTTGCTTTGTGGTGTATACAGATGAATCCAAAAGAACGCCCTTCAATGAGGAAAGTAGTAGAGATGCTTGAAGGGGATCTTCAAAGCATAGAGATGCCTCCAAGGCCTAATCTATTTCCACAAGCAAACCCAGTATTTAATGATTCTTCTGCATACACATCTAACCAGGAAGAATCCATCAGTTATTCTGAGGATGCTACTGATAATTCATGGGAAGTTACAAGTACTACGGCAGTGTCCACTTAG 2277 0.4273 MYLQGFTLHMHRRKTQSTLISECVVAFIISALSIQLFQFHQASYVSAQTGNSCPPSSCGKISEIKYPFRLKGDPESCGDPRYELTCENNNNLTTTLTLSLLSGEYHVESINYNNFTIRLVDPAVQLLHHQDSNFSCASIPRYTLYPNNFSNIPDENNPYNVYQMQGSGYYVDNVRIATGMVYFWHCNSIPVSNTLSVNTTPCSDSDGSYSSELLYVTVNDFNFDVGCQVKRVIFTSMNITNVSGSNVQKALEFGFEVSWLDGVCINHCRSQYCHLHKSNSSSALQCDPYPVGVRFCHYTEWTTYLCDAGFFTKLKTFIKALLDVIAKVTTALYWLLRLQPSRADFPDQPSPEKLTGQVILPSYFGARLLFGIVLLTILLIYRCRRRHLSVYESIENFLSHNNDLMPVRYSHKEIKRMTRGFKDKLGEGGYGCVYKGKLRSGPLVAVKVLTKSKASTGEEFINEVATIGRIHHVNVVKLIGFCVERSKRALVYEFMPNGSLDKHIFSKQGHGTDDLSCDKMYSISLGVARGIAYLHEGCDMQILHFDIKPHNILLDENFVPKVSDFGLARLYAIDDSIVSVTARGTLGYMAPELYYKNIGGVSYKADVYSFGMLLMEMASRRKNMDMRTAEDGLISGDNLSQMYFPTWVHDQFTVGEDIELEDIVTEEEKIVATKMIMVALWCIQMNPKERPSMRKVVEMLEGDLQSIEMPPRPNLFPQANPVFNDSSAYTSNQEESISYSEDATDNSWEVTSTTAVST* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00927 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Pte8g00927 758 SUPERFAMILY Protein kinase-like (PK-like) 399 701 IPR011009 -
Pte8g00927 758 MobiDBLite consensus disorder prediction 719 758 - -
Pte8g00927 758 Gene3D Phosphorylase Kinase; domain 1 395 494 - -
Pte8g00927 758 PANTHER RUST RESISTANCE KINASE LR10-RELATED 391 726 IPR045874 GO:0004672
Pte8g00927 758 FunFam serine/threonine-protein kinase PBS1-like 390 494 - -
Pte8g00927 758 ProSiteProfiles Protein kinase domain profile. 419 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00927 758 CDD STKc_IRAK 425 702 - -
Pte8g00927 758 SMART serkin_6 419 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00927 758 FunFam PR5-like receptor kinase 495 711 - -
Pte8g00927 758 ProSitePatterns Protein kinases ATP-binding region signature. 425 447 IPR017441 GO:0005524
Pte8g00927 758 MobiDBLite consensus disorder prediction 712 758 - -
Pte8g00927 758 Pfam Protein kinase domain 422 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00927 758 Gene3D Transferase(Phosphotransferase) domain 1 495 709 - -
Pte8g00927 758 Pfam Wall-associated receptor kinase galacturonan-binding 53 121 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00927 Pte-Chr8 33317389 33320390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00927 405 716 Receptor kinase-like Gene Family AT5G38280 51.111 1.40e-103 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pte8g00927 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00927 - - gmx:100305367 632.869