Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00925 ATGGAAGTGTCATGGGAACAAGGTGTGACAGATTCCATTAACACCATTTACCTACTTTTCTCTGCATACCTTGTCTTCGTAATGCAGTTGGGCTTTGCCATGCTATGTGCTGGTTCTGTACGTGCCAAGAATGCCATGAACATAATGCTAGCCAACGTTGTGGATGCCATTGCAGGCAGTGTTTCATTCTACCTCGTCGGTTTTGCATTTGCATATGGTGAAGGCTCCAACTCCAATCCATTCATTGGCACTAAATTTTTTGCTCTTGAAAGCATTCCCAACAGTACATATGACTACAGTTTCTTCCTTTACCAATGGGCTTTTGCCATAGCTGTTGCTGGAATAACGAGTGGGTCTATAGCTGAGAGAACCCATTTCAGTGCATATCTCATTTTCTCATTTTTCCTTAGTGGGTTTGTGTACCCAGTTGTGGTTCATTGGGTTTGGTCATCCAGCGGCTGGCTCAGTCCCAACTCAAGTTGCTTGTTTCTGGGGTCAGGTGCAATTGACTTTGCAGGAAGCGGGGTGGTGCATTTGGTTGGTGCAGTTGCAGGGTTATGGGGCTCTTGGATTCAAGGTCCAAGAGTTGGTAGGTTTGATGCCTTTGGCAAAGCTGTGCCCATGAAAGGCCATAATGCAACTCTTGTTGTACTTGGGACATTCTTGTTATGGTTTGGATGGTTTGGATTTAATCCAGGGTCATTCGATAAAATTCTTGTGCCCATATCAACCAAAATTTATCAAAGCAATGGGATTGCAGTGGCTAGAACAGCAGTGACTACCCTATTAGCAGGGTCTATTTCAGGCCTAGTGACCCTATTTGCCCAGAAATTTCTACTGGGTCATTGGGATGTGTTAGATGTTTGCAATGGAGTGCTAGGTGGGTTTGTTGCAATTACATCTGGCTGCTCAGTAGTTGAGCCATGGGCAGCTATCATTTGCGGTTTTGTTTCAGCTTGGGTATTGATTGGATTGAATATATTGGCACTGAAATTGAATTATGATGATCCATTACAAGCTGCTCCGTTACATGGCGGGTGCGGTGCATGGGGACTGATCTTCACTGGCCTGTTTGCCAAACAAGAATTCTTGCTCCAAGCCTATCCTCCTGAAACATCTGGGTTGTCTAGATCACATGGTCTTTTTCTTGGAGGGGGATGGGGTTTGCTTGGAGCACAAGCCATGGAGATATTTGCAATTGTGTGTTGGGTCAGTGTGACGATGGGCCCTCTGTTCTATACATTACACAAGATGCAAATACTAAGGATCTCTATTGATGATGAAATAGCAGGCCTTGACATCTCAAGCCATGGAGGCCATGCCTATGTTTCCCAAGAGGAAAACCAACCTCAATTATATGCACATTACACTGCTTTACAAGGTGATAGTAGTTTAATCAGGACTCACAACCCCTGA 1416 0.4463 MEVSWEQGVTDSINTIYLLFSAYLVFVMQLGFAMLCAGSVRAKNAMNIMLANVVDAIAGSVSFYLVGFAFAYGEGSNSNPFIGTKFFALESIPNSTYDYSFFLYQWAFAIAVAGITSGSIAERTHFSAYLIFSFFLSGFVYPVVVHWVWSSSGWLSPNSSCLFLGSGAIDFAGSGVVHLVGAVAGLWGSWIQGPRVGRFDAFGKAVPMKGHNATLVVLGTFLLWFGWFGFNPGSFDKILVPISTKIYQSNGIAVARTAVTTLLAGSISGLVTLFAQKFLLGHWDVLDVCNGVLGGFVAITSGCSVVEPWAAIICGFVSAWVLIGLNILALKLNYDDPLQAAPLHGGCGAWGLIFTGLFAKQEFLLQAYPPETSGLSRSHGLFLGGGWGLLGAQAMEIFAIVCWVSVTMGPLFYTLHKMQILRISIDDEIAGLDISSHGGHAYVSQEENQPQLYAHYTALQGDSSLIRTHNP* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00925 471 NCBIfam ammonium transporter 14 442 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pte8g00925 471 Gene3D Ammonium transporter AmtB like domains 3 459 IPR029020 -
Pte8g00925 471 ProSitePatterns Ammonium transporters signature. 170 195 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pte8g00925 471 PANTHER AMMONIUM TRANSPORTER 10 446 - -
Pte8g00925 471 SUPERFAMILY Ammonium transporter 10 423 - -
Pte8g00925 471 Pfam Ammonium Transporter Family 18 442 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pte8g00925 471 FunFam Ammonium transporter 2 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00925 Pte-Chr8 33303568 33304983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00925 12 451 Inorganic Solute Cotransporters AT4G13510 64.706 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00925 K03320 - qsa:O6P43_014033 722.62