Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00918 ATGTATGCAGAGACGGGTCTCCTGTTTCCATGTTTTCAGAATTTCTCGCAAGAACTTCAACAACTCGAGGAGTACTGCAAAACCCAGAAGCCAAATGTTTCAACACAAAGTAACCTAGCTCAGGTCTCAAACATATCCGAATATGACCTGGGTGGAGAAGGGGATCTTTTCCAAGCTCCCAAAACAATCATCGAAGAACCTGTCATGGGCCTGGATCCCATGGCAGCGGCAATTTCTATGATATCTTGCAGTGAAGATGCAATATCCCATCAGGGAATAGAAACGGTAGATATGGATTCCCTTGACAACGAGCAGCTTTTGAATAATGTATTTTATGAGTGCGAGAAAAAGCTCCTGGAAGAAGAAGTGATAGAAGCACCTCTCTTTGATATTCTCGATATCAAGATTCCTATTTTGAAGTCTGATGAAAACCAAAGTCAAGAAGACAAACCTTTTGTTGATGTACCATTTCAAAAGAGTGTCAGTTTGGGATCCTTGAGCTCAATGGACTGGATGCATGCGACGGCTATCAAACCTGCTTTTCTGGATTTTCCAGGAATGGATTTTAGTGTTTACGGGATGCGAAGGGCATACAGCGAAGGAGATGTTAAGACTCTTGGTAATCTAAATGTGAGCGCTGTCCAGTCTCCCCTTGAGAAGCCTATTCTTATCAGCAACTGCACCAGCGAGGAACGCCAGGAGAAGCTTTCGAGGTATAGGAATAAGAAGACGAAGAGAAACTTTGGAAGAAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGTCAGCCGCGAATTCGTGGAAGGTTTGCAAAAACTGAGGAATGTGATGCAAAGAAGCAATGA 849 0.4335 MYAETGLLFPCFQNFSQELQQLEEYCKTQKPNVSTQSNLAQVSNISEYDLGGEGDLFQAPKTIIEEPVMGLDPMAAAISMISCSEDAISHQGIETVDMDSLDNEQLLNNVFYECEKKLLEEEVIEAPLFDILDIKIPILKSDENQSQEDKPFVDVPFQKSVSLGSLSSMDWMHATAIKPAFLDFPGMDFSVYGMRRAYSEGDVKTLGNLNVSAVQSPLEKPILISNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEECDAKKQ* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00918 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 175 276 IPR045281 GO:0009909
Pte8g00918 282 Pfam CCT motif 232 274 IPR010402 GO:0005515
Pte8g00918 282 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00918 Pte-Chr8 33209183 33213180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00918 207 276 C2C2-CO-like Transcription Factor Family AT5G57660 41.667 4.40e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte8g00918 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00918 - - qsu:112017994 413.69