Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00905 ATGCTATCTTTGCCTCATGATCATACTGATACCCATATAACAACAGCATTGAAGTCGCTACTACGCTGGCACCCTTCAGATTCATGGGGCTATCAAGTAATCCTTGAAAGGGTGACCGGACAAGTTATTTTGCCATCGTTTTTTGCAAGATTGCTATTTGGAATTGCACTCTTGACCACGCTCCTAATCTACATATGTCGAAGGAGACATTTGTCAGTGTACGAAAACAAGTTGGGTGAAGGAGGCTATGGCTGTGTCTACAAAGGAAAGCTACGCAGTGGCCCTCTTGTTGCAGTCAAGGTGTTGAATAAATCCAAAGCCTCCACTGGTGAAGATTTTATCAATGAAGTTGCAACCATAGGAAGGATCCACCATGTAAACGTGGTGAAACTCATCGGGTTTTGTGTGGAAGGATTCAAGCGTGCTCTTGTCTATGAGTTCATGGTCAATGGTTCTCTTGATAAACACATATTTTCCAAACAAGACAATAGTACTGATGATCTAAGCTGCGACAAAATGTATTCAATTTCTCTTGGGGTGGCTCGAGGGATTGCATACCTTCATGAAGGTTGTGACATGCAGATTCTGCATTTTGATATCAAGCCTCACAACGTTCTTCTGGATGAAAACTTTGTCCCAAAGGTTTCAGACTTTGGACTAGCCAGACTTTATGCGATAGACGAGAGCATTGTCTCAGTGACTGCCAGAGGAACATTGGGATATATGGCTCCTGAGTTGTACTACAAGAACATTGGTGGAGTCTCCTATAAGGCTGATGTCTATAGCTTTGGGATGCTGTTAATGGAGATGGCGAGCAGAAGAAAAACCATGAACGTCGTCACAGAGTATCTAAGTGCAAATAACTTGAGCCAAAATTATTTTCCCTTGTGGATTCACGACCAATTTTCTGCTGGAAGAGATGTAGAGATAAGAGACATTGCGAGTGAAGAAGAAAAGAACGTAGCTACAAAAATGATAATGGTTGCTCTGTGGTGCATACAGATGAATCCTCGGGAACGCCCTTCGATGAAGAAAGTGTTGCAGATGCTTGAAGGAGAGCTCGAAAGACTTGAAATGCCTCCCAGGCCTGCACTGTATCCAGAAGAAAGGCCACCTGCAACTGCGTCTACTAGCATGTCGGATAACCAAGAAGAATCAAGCGATCATTCAGAGGATGTGGTCACTGAAAATTCATGA 1197 0.4319 MLSLPHDHTDTHITTALKSLLRWHPSDSWGYQVILERVTGQVILPSFFARLLFGIALLTTLLIYICRRRHLSVYENKLGEGGYGCVYKGKLRSGPLVAVKVLNKSKASTGEDFINEVATIGRIHHVNVVKLIGFCVEGFKRALVYEFMVNGSLDKHIFSKQDNSTDDLSCDKMYSISLGVARGIAYLHEGCDMQILHFDIKPHNVLLDENFVPKVSDFGLARLYAIDESIVSVTARGTLGYMAPELYYKNIGGVSYKADVYSFGMLLMEMASRRKTMNVVTEYLSANNLSQNYFPLWIHDQFSAGRDVEIRDIASEEEKNVATKMIMVALWCIQMNPRERPSMKKVLQMLEGELERLEMPPRPALYPEERPPATASTSMSDNQEESSDHSEDVVTENS* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00905 398 Gene3D Transferase(Phosphotransferase) domain 1 149 359 - -
Pte8g00905 398 Gene3D Phosphorylase Kinase; domain 1 78 148 - -
Pte8g00905 398 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Pte8g00905 398 SUPERFAMILY Protein kinase-like (PK-like) 72 351 IPR011009 -
Pte8g00905 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Pte8g00905 398 FunFam PR5-like receptor kinase 148 361 - -
Pte8g00905 398 ProSiteProfiles Protein kinase domain profile. 72 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00905 398 Pfam Protein kinase domain 75 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00905 398 MobiDBLite consensus disorder prediction 384 398 - -
Pte8g00905 398 PANTHER RUST RESISTANCE KINASE LR10-RELATED 74 378 IPR045874 GO:0004672
Pte8g00905 398 Coils Coil 397 398 - -
Pte8g00905 398 MobiDBLite consensus disorder prediction 358 398 - -
Pte8g00905 398 SMART serkin_6 72 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00905 Pte-Chr8 32653048 32654502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00905 68 390 Receptor kinase-like Gene Family AT5G38280 48.930 2.60e-100 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pte8g00905 Pkinase 6.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00905 - - qsa:O6P43_016904 468.774