Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00897 ATGGCTCTGTCGACTCCTCCTAAAACGCAAAATTTTTTGTTAACCAAGCTTCATGGCACCTCCAACTCCAGGACCCACAACCCTAAAACTAACTTAGCTACAATTAAATGGAAAAGCGCCAGATGCTGCTCAGCTATAGCCATTGACGCCCCTTCTTCTTTGACTGGGACTACTGCTATTAGGTGGGCCTCCAAATGTTTGCAGGGTCTCCGGGATGAGATGGAAGACGACACCATAGTTCGCGCTGATGGGCTTGATGGCTTCTCCTTTGCTGCTGTATTTGACGGCCATGCCGGATTCTCTTCCGTTAAGTTTCTCAGGGATGAGCTATACGACGAGTGTCTTTTAGCTTTACAAGGAGGGTTGCTATTGAATGGGAAAGATTTCAAAGCCATTAAAGAAGCATTACATGAGGCATTTTTAAATGCTGATACAAGGTTGTTAAATTGGCTTGAAACAACTTATGGAGAGGATGATTCTGGTGCAACAGCAACTGTTATATTCATTGGAGATGATATTCTTTATATTTCACATGTTGGTGATTCTAATGTGGTTTTGTCTCGAGCTGGAAAGGCAGAAGTGCTCACTAGTCCTCATCGTCCTTATGGAAAGCACAAATCTGCTCTTCAAGAAATTAAAAGGATCAGAGATGCAGGTGGATGGATTTCCAATGGTCGGATATGCGGGGATATTGCCGTTTCTCGTGCTTTCGGGGATATGCGATTTAAAACAAAGAAGAATGAGATGCTAAAGAAAGGTGTCCAAGAAGGGAGATGGACAGAAAAATTTGTATCACGAGTACAATTCAACAATGACTTGGTTGTGGCATCTCCTGACATTTATCAAGTGCCACTTGGTGCAGAGGCAGAGTTTATAATCTTAGCATCTGATGGCTTGTGGGATTACATGAGTAGCTCAGAAGTTGTTAGTATTGTGAGGAATCAACTTCGGAAACATGGAGATGTTCAGCTCGCATGTGAAGCACTTGCACAAGCAGCTCTGGATCGACGCTCAGGAGACAATGTCAGTATTATTATCGCTGATTTAGGGCGAACAGATTGGAGTGCTTTACCACTCCAGCAACAAAATGTTGTATATGAACTCGGTCAAGCTTTTGCAACAATTGGTATTGTATCTCTAGCAATTTGGATGACATCACAGCTTTCTCTCTGA 1173 0.4288 MALSTPPKTQNFLLTKLHGTSNSRTHNPKTNLATIKWKSARCCSAIAIDAPSSLTGTTAIRWASKCLQGLRDEMEDDTIVRADGLDGFSFAAVFDGHAGFSSVKFLRDELYDECLLALQGGLLLNGKDFKAIKEALHEAFLNADTRLLNWLETTYGEDDSGATATVIFIGDDILYISHVGDSNVVLSRAGKAEVLTSPHRPYGKHKSALQEIKRIRDAGGWISNGRICGDIAVSRAFGDMRFKTKKNEMLKKGVQEGRWTEKFVSRVQFNNDLVVASPDIYQVPLGAEAEFIILASDGLWDYMSSSEVVSIVRNQLRKHGDVQLACEALAQAALDRRSGDNVSIIIADLGRTDWSALPLQQQNVVYELGQAFATIGIVSLAIWMTSQLSL* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00897 390 ProSitePatterns PPM-type phosphatase domain signature. 90 98 IPR000222 GO:0043169
Pte8g00897 390 SMART PP2C_4 51 347 IPR001932 -
Pte8g00897 390 ProSiteProfiles PPM-type phosphatase domain profile. 61 349 IPR001932 -
Pte8g00897 390 Pfam Protein phosphatase 2C 64 342 IPR001932 -
Pte8g00897 390 SUPERFAMILY PP2C-like 55 350 IPR036457 -
Pte8g00897 390 Gene3D - 60 354 IPR036457 -
Pte8g00897 390 PANTHER PROTEIN PHOSPHATASE 2C 43 347 IPR015655 GO:0004722|GO:0006470
Pte8g00897 390 CDD PP2Cc 66 349 IPR001932 -
Pte8g00897 390 FunFam Protein phosphatase 2C 57 60 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00897 Pte-Chr8 32386309 32390752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00897 43 326 PP2C-type Phosphatase Gene Family AT4G27800 68.772 7.31e-146 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00897 K04457 - qsa:O6P43_019953 580.867