Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00883 ATGAAAAGGAGGATGGGCGGTTCATCTGAGAAGACCGAGACCAAGTTCCTTCAAGAACTGGTTCTTTACGCCGCAAGTGCTGCACTAAGTTGTTTAGTTTTGTTTGCTGGGCTCCGGCATCTGGACCCGAACCGAGAGGCATCTAAGAAGGCCCTTGAGCAAAAGAAGCAGATAGCTAAGCGGTTAGGTCGTCCTCTTATTCAAACAAATTCTTACGAGGATGTTGTAGCCTGTGATGTGATCAACCCTGACGACATTGATGTAGAGTTTGAATCAATTGGCGGGTTGGAAAGAATCAAGGAAGCTTTATATGAGCTGGTCATACTGCCCCTTAGAAGACCTGAGCTATTTTCTCATGGTAAGCTTCTTGGGGCACAGAAGGGGGTCTTGTTGTATGGTCCACCTGGCACTGGAAAAACAATGCTTGCCAAAGCTATTGCAAAGGAATCTAAAGCTGTTTTTATCAATGTGAGGATATCAAATCTGATGAGCAAATGGTTTGGTGATGCTCAAAAACTTGTGGCTGCTGTTTTTAGTTTGGCTTATAAACTACAACCTTCTATTATTTTCATTGATGAAGTCGACAGTTTCTTGGGCCAGCGCCGCACGACTGATCATGAAGCTCTATTAAACATGAAGACTGAGTTCATGGCTTTGTGGGATGGATTCACCACTGATCAGAATGCTCAGGTTATGGTTCTTGCTGCAACTAATCGTCCATCAGAGCTTGATGAAGCAATACTTAGGCGTCTTCCTCAGGCATTTGAAATTGGACTACCTGATCAGAAAGAAAGAGCCGAGATACTCAAAGTTATTTTGAAGGGTGAGAGAGTCGAAGATGGTATAGACTATATCCATCTGGCTGGCTTGTGTGAGGGTTACACTGGTTCAGATATTCTAGACCTCTGTAAGAAGGCTGCCTACCTTCCAATTAGGGACCTTCTTGATGAAGAGAAAAAGGGGAAACAGTCTAATGCACCAAGGCCACTGACACAGTCAGATTTGGAGAAGGTCCTCGCCACTTCGAGAAACACTAGAACTGCTGCAAGCGAATACACTGGATTAAGAGCACAATCACCTGGGTGGTCACGGAATAGAGAGGTGGGTGATTATCAGGTTCAAGCTGCAATCACTGAACTGTCTAAGGTTGTCTTTTCTCAAATATTGAACCTCCAACCAGATCCTCTGGACCAGGATCCTTAA 1203 0.4447 MKRRMGGSSEKTETKFLQELVLYAASAALSCLVLFAGLRHLDPNREASKKALEQKKQIAKRLGRPLIQTNSYEDVVACDVINPDDIDVEFESIGGLERIKEALYELVILPLRRPELFSHGKLLGAQKGVLLYGPPGTGKTMLAKAIAKESKAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPSIIFIDEVDSFLGQRRTTDHEALLNMKTEFMALWDGFTTDQNAQVMVLAATNRPSELDEAILRRLPQAFEIGLPDQKERAEILKVILKGERVEDGIDYIHLAGLCEGYTGSDILDLCKKAAYLPIRDLLDEEKKGKQSNAPRPLTQSDLEKVLATSRNTRTAASEYTGLRAQSPGWSRNREVGDYQVQAAITELSKVVFSQILNLQPDPLDQDP* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00883 400 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 31 342 - -
Pte8g00883 400 FunFam ATPase family AAA domain-containing protein 1 87 264 - -
Pte8g00883 400 CDD RecA-like_ATAD1 92 257 - -
Pte8g00883 400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 340 IPR027417 -
Pte8g00883 400 SMART AAA_5 125 261 IPR003593 GO:0016887
Pte8g00883 400 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Pte8g00883 400 Gene3D - 87 345 IPR027417 -
Pte8g00883 400 Gene3D - 260 340 - -
Pte8g00883 400 ProSitePatterns AAA-protein family signature. 231 250 IPR003960 GO:0005524|GO:0016887
Pte8g00883 400 Pfam AAA+ lid domain 282 317 IPR041569 -
Pte8g00883 400 Pfam ATPase family associated with various cellular activities (AAA) 129 258 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00883 Pte-Chr8 32317738 32321217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00883 84 327 Calmodulin-binding Proteins AT3G56690 33.603 4.16e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00883 K22530 - cave:132167957 663.685