Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00872 ATGGGGATTGCAGAAGGTGAGAAAAACAACCCTGGTTTTCATCTTCCCATCCCTTACCTCCATTCACATTGTCGCGAGAAGAGGAGTATTCCAAAAGGGTGTTTGGCTATTTGGGTTGGTCATGAAGGTGAAGAGCAACAGAGGATTGTGATTCCAATCATCTACTTCAAGCACCCACTGTTCATGCAGTTGTTGCAAGAAGCTGAGGAAGAATATGGCTTTGATCATAAAGGAGCCATCGCCATTCCTTGTCGAGTTGAAGAGTTTCGCACTGTCCGAGGCATGATTGACAAGGAAGTATCACTCCACACCCACCATCAGCCAATGTGGTGCTTTAGGATTGATGAAAATGACGATGATGAAAAAGCTCGAGTCATTCAATGTCGGCATCATGAATCAAATTTTCCACTTTCAGATATGAAAGAAATGTAA 432 0.4329 MGIAEGEKNNPGFHLPIPYLHSHCREKRSIPKGCLAIWVGHEGEEQQRIVIPIIYFKHPLFMQLLQEAEEEYGFDHKGAIAIPCRVEEFRTVRGMIDKEVSLHTHHQPMWCFRIDENDDDEKARVIQCRHHESNFPLSDMKEM* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00872 143 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 91 IPR003676 GO:0009733
Pte8g00872 143 Pfam Auxin responsive protein 25 93 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00872 Pte-Chr8 32246130 32246645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00872 30 90 Calmodulin-binding Proteins AT3G43120 54.098 1.99e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00872 K14488 - cit:102614790 152.14