Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00869 ATGGGTAAGAATGGAGCAAGCTCTTGGTTTACAGTAGTGAGAAAGGCTTTCAGTTCTCCCATTAAAGAGAACGACCAAAGAAGCAGTAGGATAAGAGAAGACAATGAACAAGAGGAGGAAGAAAAGAGGAGAAGAAAACGAAGATGGATTTTTAAGATGCCTAAGGAAACAGTTGCCCAACAATGTGAGGCAAGGATAATAATCACTACTGCTAATATAATTGAAACTTGTAACGAAGGGACAAAAGATTCAGAGGGTGTTGATGTAGACCAAAGCCATGCAATTGCAATAACCATTGCAACCGCAGCCACTTCACCGGCAGCAGTAGCTAGGGCTCAAGCTGCTGTTGACGTGGATCGGCTTGCCAGGCCTTCTATCTGTGTGAAAGAATATCATGCTGCCGTTGTTATTCAGAGTGCTTTCAGAGGATTTCTGGCCAGGATTGCTCTTCGTGCACTTAGGGGAGTAGTGACGCTGCAGGCACTGGTAAGAGGCCACAATGTCAGGAATCGAGCACAGATGACTCTCAGATGCATGCAAGCGATGCTTCGAGTCCAAACTCGTATGTGCAAGGAACGGGCCGCGAAGCTCTCAGATGAGAACAGCACAGATTACAGAAAATCTATGTCCAACGAGTATGCTGGGGATAATTATGGGATTTTCTTTGGTGATTCCTTACAAACAGTCCCTAGTTTTCAAGATGTGCATAGCAAACTTGATGAAGATGCCTTAAAACGTGAAATTGCTCTAGCTTATGCCTTCTCGCATCAGATATGGGGAACTGGTGATGACCAAAGCTACAGTGGGGAAGAGCTGGATGTGAATCCTGAATGGTCGTCTCAATGGTCAGGAAACGACAGGGAGACGGGTAGAGCTTCAAGTGATCAAAGGGAACCTATAAAAATTGTTGAAATTGACACCTACAGACCTTATCCGACTAACGATGACAGGTCAAAGAACCAGCAGCAAAATTATTGCCATCAGCAACTGATGAGCCCTAATTCACTTTCTTTAGCCTCTCCTGGACGTAGAGCAAGCAACAATCAGTACAATCATTCACCATTAACACCATCCCCTGTCAAAGCAAGGCATCTTCAAGTGCATTCAGCTAGCCCTCGTTGTCTAAGGTGGTCTAATTCCATGCCTCAAATGTCTGGTGTGGTAAACAACTACTTCCATGGAACAAGCGTCAGCCTTGGATGTAAGGTTGATGCGGTGCCAAACTATATGGCAGCGACAGCATCTGCCAAGGCTCGGAGTCGATGGCAAAGCGCACCGAGGCATGGGAATGCAACCCCAGAAAAGGAAAGAGGTGGATCAGTGAAGAAGAGACTCTCATTTCCGGTACTCAATCCGTAG 1359 0.4584 MGKNGASSWFTVVRKAFSSPIKENDQRSSRIREDNEQEEEEKRRRKRRWIFKMPKETVAQQCEARIIITTANIIETCNEGTKDSEGVDVDQSHAIAITIATAATSPAAVARAQAAVDVDRLARPSICVKEYHAAVVIQSAFRGFLARIALRALRGVVTLQALVRGHNVRNRAQMTLRCMQAMLRVQTRMCKERAAKLSDENSTDYRKSMSNEYAGDNYGIFFGDSLQTVPSFQDVHSKLDEDALKREIALAYAFSHQIWGTGDDQSYSGEELDVNPEWSSQWSGNDRETGRASSDQREPIKIVEIDTYRPYPTNDDRSKNQQQNYCHQQLMSPNSLSLASPGRRASNNQYNHSPLTPSPVKARHLQVHSASPRCLRWSNSMPQMSGVVNNYFHGTSVSLGCKVDAVPNYMAATASAKARSRWQSAPRHGNATPEKERGGSVKKRLSFPVLNP* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00869 452 MobiDBLite consensus disorder prediction 25 44 - -
Pte8g00869 452 PANTHER IQ-DOMAIN 5-RELATED 1 448 - -
Pte8g00869 452 MobiDBLite consensus disorder prediction 290 304 - -
Pte8g00869 452 Pfam Protein of unknown function (DUF4005) 357 450 IPR025064 -
Pte8g00869 452 MobiDBLite consensus disorder prediction 266 359 - -
Pte8g00869 452 MobiDBLite consensus disorder prediction 314 356 - -
Pte8g00869 452 MobiDBLite consensus disorder prediction 416 452 - -
Pte8g00869 452 Gene3D - 129 195 - -
Pte8g00869 452 Pfam IQ calmodulin-binding motif 132 149 IPR000048 GO:0005515
Pte8g00869 452 Pfam IQ calmodulin-binding motif 154 171 IPR000048 GO:0005515
Pte8g00869 452 MobiDBLite consensus disorder prediction 20 44 - -
Pte8g00869 452 ProSiteProfiles IQ motif profile. 154 181 IPR000048 GO:0005515
Pte8g00869 452 SMART iq_5 129 151 IPR000048 GO:0005515
Pte8g00869 452 SMART iq_5 152 173 IPR000048 GO:0005515
Pte8g00869 452 Coils Coil 21 48 - -
Pte8g00869 452 MobiDBLite consensus disorder prediction 272 289 - -
Pte8g00869 452 ProSiteProfiles IQ motif profile. 130 158 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00869 Pte-Chr8 32221545 32223995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00869 1 452 IQD Protein Family AT1G01110 35.657 2.06e-64 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00869 - - qsa:O6P43_014939 414.461