Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00865 ATGGGTGAGGTTGCGGTGAGTAGTGAGGATTTGGGAGGGAAGAGGTTGGAGATGGAAGCAGAGAAAGCCAAGGAAGGATGCGGGATTGTGAAGCAAGGTGAAGAGTCGAGTGGATGGGTGATCATGTGGGAGAAGTTATTGAAGAGAAAGACGCTGAGGGTGTTGTTGATTGAAGCTGATGATTCCACAAGGCAAATAATCGCTGCTCTGCTGAGGAAATGCAGTTACAAAGTGGCTGCCGTTTCTGATGGTTTAAAGGCATGGGAGATACTGAAAAACAGACCAAATAACATTGATCTGATAATGACAGAAGTAGATTTGCCAGCAATATCTGGATTTGCACTTCTCACTTTAATCATGGAGCATGAGATATGCAAGAACATTCCTGTCATAATGATGTCATCACATGATTCGATCAGCAGGGTCTACAAATGCATGTTGAGAGGCGCTGCAGACTATCTTGTTAAGCCAATTAGGAAAAATGAGCTCAGCAATCTGTGGCAGCATGTTTGGAGAAAACAAACTTCAATGTCTGGCTTAAATGGCCTCCATGAAGAGAGTTTAGCCCAACAGAAGGTTGAAGCAACTTGCGAGAATAATACTGCAAGTAATCATTCAAGTAGTGATATGGCATCAGTTCAAAAAAGCAAGGAATTGATCGAGAAAGGAAGTGACGCACTGAGTTCTAGTAAAACGCCTGACTTGGAAGCTGAGAGTACTCCTATTGAAGATCTTGAGGAGCATGTTCAATCGAAGTATGACAAAGCATATCTGAGTGTGGAAAAGGTCCAAGAGAATGAGCCATGCTTCGACTTAGGCAATAGCAAGAATGGGGACACTGCTGCACCTCTTGGCAGAGACTTAGATCCTTTATATCACAAGGCGAGGGTTAGCAACTTCAGTGAGGGTTGTGACAATAACAATGCTCTTGTCAGCTCTACTTCTAGGGAGGCCACTAACTTCACATCCCGTACTTATCCCACCTATGATCAGACAAGCAACATTGCTCCTTCTCCACAGCTGGATCTTTCCTTACGAAGGTCTAATTCCCACAGCTTTGAGAATGAAGCCACTGAAGAGAGGAACAACACTCTTGTGCATTCCGATTCCTCAGCTTTCAAGAGGTGGGTTTTGGTAAACATTGCCCAGGAATTCTTTATTTGCTCACGAACCTTGTTTTCAGTACTTTCTTTGGAAAGGGCTGCAAATCATGCTTCAGAGTTTTATTACAGACTGTTTGTGTTAGTTAATAGATATCATAATTCCTTTTGCAGGTACAAATTGCAAACGTCTCCTATGGCTGAGAAAATAGGGTGTGGGACGGAGTCTGACAAGAACACATGCAACATTGTAAATGGCGACAGCTCTGAAACTTCAGCACCTAGTTTGGAACGAAGTTTTTCTGTTGCCAATGTGCATGCCAAAGAATCTGTACTTCCTCCAGTGTTTAATACACAATCAGGCGTTCCATTACCAATTCTTTGCTTGAGTTCAGTTGCTCACAAGGAAACCTCCTTTCCAGCAAGCATGTTTCAACATTCAAATATTGAATATCATAATTCACCTAAGCTATGTAAGCCTCATGATGAAAATGCAACAAACGGAAATGAACTAACCTTGCACAGGCAAGAAGGAATGGAATCCTCTGAGAATCAAGGAGGACAAGTTTCTCCTACCACTGATCAAAGCGCATCCAGCGGTTTCTGTAATGGTGCTTTCATCCATTTGAACAGCGTTGCAAATGGAAGCAACTGTGGAAGCGATAGTAATGCTGATCAGACCCCTGCTGTCATGACAGGTTCTGAAATCAAAACTGACGATTTGACGAAGTATAGACTTTCTAATCGATCAATTCAAAGAGAAGCAGCTCTGACAAAGTTCCGCTTGAAAAGGAAAGAGAGGTGCTATGAAAAGAAGGTTCGTTATGAAAGCAGAAGAAAACTTGCAGAGAAACGCCCCCGAGTTAAAGGACAATTTGTTCGTCAACTGCAGCCTGATCAACACCCTGCTACAGAAAATAATGGTAGTTCACATGAGGGCTAG 2043 0.4278 MGEVAVSSEDLGGKRLEMEAEKAKEGCGIVKQGEESSGWVIMWEKLLKRKTLRVLLIEADDSTRQIIAALLRKCSYKVAAVSDGLKAWEILKNRPNNIDLIMTEVDLPAISGFALLTLIMEHEICKNIPVIMMSSHDSISRVYKCMLRGAADYLVKPIRKNELSNLWQHVWRKQTSMSGLNGLHEESLAQQKVEATCENNTASNHSSSDMASVQKSKELIEKGSDALSSSKTPDLEAESTPIEDLEEHVQSKYDKAYLSVEKVQENEPCFDLGNSKNGDTAAPLGRDLDPLYHKARVSNFSEGCDNNNALVSSTSREATNFTSRTYPTYDQTSNIAPSPQLDLSLRRSNSHSFENEATEERNNTLVHSDSSAFKRWVLVNIAQEFFICSRTLFSVLSLERAANHASEFYYRLFVLVNRYHNSFCRYKLQTSPMAEKIGCGTESDKNTCNIVNGDSSETSAPSLERSFSVANVHAKESVLPPVFNTQSGVPLPILCLSSVAHKETSFPASMFQHSNIEYHNSPKLCKPHDENATNGNELTLHRQEGMESSENQGGQVSPTTDQSASSGFCNGAFIHLNSVANGSNCGSDSNADQTPAVMTGSEIKTDDLTKYRLSNRSIQREAALTKFRLKRKERCYEKKVRYESRRKLAEKRPRVKGQFVRQLQPDQHPATENNGSSHEG* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00865 680 Pfam Response regulator receiver domain 54 165 IPR001789 GO:0000160
Pte8g00865 680 MobiDBLite consensus disorder prediction 544 563 - -
Pte8g00865 680 MobiDBLite consensus disorder prediction 644 680 - -
Pte8g00865 680 ProSiteProfiles CCT domain profile. 620 662 IPR010402 GO:0005515
Pte8g00865 680 CDD psREC_PRR 54 157 - -
Pte8g00865 680 SMART REC_2 52 167 IPR001789 GO:0000160
Pte8g00865 680 Pfam CCT motif 620 662 IPR010402 GO:0005515
Pte8g00865 680 Gene3D - 51 265 - -
Pte8g00865 680 MobiDBLite consensus disorder prediction 196 214 - -
Pte8g00865 680 PANTHER TWO-COMPONENT RESPONSE REGULATOR 52 315 IPR045279 GO:0009736
Pte8g00865 680 SUPERFAMILY CheY-like 51 185 IPR011006 -
Pte8g00865 680 MobiDBLite consensus disorder prediction 196 244 - -
Pte8g00865 680 ProSiteProfiles Response regulatory domain profile. 53 171 IPR001789 GO:0000160
Pte8g00865 680 MobiDBLite consensus disorder prediction 664 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00865 Pte-Chr8 32010658 32014620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00865 616 669 Response Regulator Gene Family AT5G24470 79.630 1.56e-21 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pte8g00865 Response_reg 1.5e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00865 K12130 - qsa:O6P43_020012 572.778