Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00852 ATGTGTGTTGTAACAACGGGTGTAGATGACATGGCTGCGGTATCTCTCAGTTCATTACCTTTAGGGTTTAGATTTCGGCCCACGGATGAGGAGCTCATTGATTACTACCTCCGCTTCAAGATCAATGGCAACGACGATGAAGTCAGGGTCATACGTGAAATAGATGTCTGCAAATGGGAGCCTTGGGATCTGCCTGATTTATCAGTCATACAGACGAAGGATCCAGAGTGGTTCTTCTTCTGCCCTCAGGACCGGAAGTATCCCAATGGCCATCGGTTGAACCGTGCAACAACACAAGGATATTGGAAGGCTACTGGAAAAGATCGGAAAATTAAGTCTGGTTCAACCTTGATTGGAATGAAGAAGACTCTGGTCTTTTATACTGGACGTGCACCAAAGGGGAAGAGAACTTATTGGGTTATGCATGAATATCGTCCTACTCTCAAGGAGCTTGATGGCACCAATCCTGGCCAGAATCCCTATGTCCTCTGTAGATTGTTCAAGAAACAAGATGACAGTCTAGAATCTCCAAATTGCGAGGATGCTGAACGTGCTGTTTCATCTCCAACTGCTAGATCTTGTCAAGAAGATTTGCATTCAGATCTAGCTGGTGCTGGAGCATCTGCTTCATTGTGCACAGTAGATCAAAAGCATGTAGTAATGGCTTCCTGTAATGCTGAATTTTCTGAAGAAACAACTTCCAATGTTATCAACCAGGTTGACTGTCATACTGATGGATGTGATGTTTATGAACAGCAGAAACAAATCACTACACCGACAACTCCAGAGGTTGCATCGGTGAACAAGATTTTACCATAG 819 0.4408 MCVVTTGVDDMAAVSLSSLPLGFRFRPTDEELIDYYLRFKINGNDDEVRVIREIDVCKWEPWDLPDLSVIQTKDPEWFFFCPQDRKYPNGHRLNRATTQGYWKATGKDRKIKSGSTLIGMKKTLVFYTGRAPKGKRTYWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKQDDSLESPNCEDAERAVSSPTARSCQEDLHSDLAGAGASASLCTVDQKHVVMASCNAEFSEETTSNVINQVDCHTDGCDVYEQQKQITTPTTPEVASVNKILP* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00852 272 Gene3D NAC domain 28 173 IPR036093 GO:0003677|GO:0006355
Pte8g00852 272 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
Pte8g00852 272 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 224 - -
Pte8g00852 272 SUPERFAMILY NAC domain 11 169 IPR036093 GO:0003677|GO:0006355
Pte8g00852 272 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Pte8g00852 272 FunFam Nac domain-containing protein 86 28 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00852 Pte-Chr8 31956131 31957873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00852 11 202 NAC Transcription Factor Family AT4G35580 70.833 5.07e-98 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte8g00852 NAM 6.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00852 - - gmx:100778903 372.089