Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00835 ATGCAAACGGAGAAAGGGAAAGAAGAAGATAAGAAGAATAAGGATGGCGCCGAAACATTGCCATTCTACAAACTGTTGAGCTATGCTGATGGCATAGATTGGTTTTTGATGGCCCTTGGGACTTTGGGATCTATAGTCCACGGCATGGCTTTACCTGTTGGCTATCTGTTGCTGGGCAAGGCCCTCAGTGCTTATGGAAACAACATTAATGATACCGATGCCATGGTTCGAGCTCTCAAGAAGGAAGACATGCATTATGTCTACAACTCGTGTTCGATGTTTGCAGAAATCGGTTGTTGGATGCACGCAAGTGAAAGACAGTTAGCACGTCTAAGATTATCGTATATAAAAGCAGTGCTCAGTCAGGAAGTTGGGGCTTTTGATACAGATCTAACCAGTGGAAAAATCATGAATGGCATGACCAATAACATGAGTATCATACAAGATGCTATTGGTGAAAAGCTGGGGCATTTTATGTCAAGCTTTGCAACTTTTGCTGCGGCGGTCGTTATTGCTACTCTATGTGCTTGGGAAGTAGCATTGCTTATCCTGGTGATTCTTCCGTTGATTCTTCTAGTAGGCGCCACCTACACCAAAAACATGACCACTGTATCAGCAGCTAAAATGATATATCAGTCAGAAGCAACGTCAAAAATAGAACAGACCATATCTCAAATTAAAACAGTGTATGCATTTGTGGGAGAAAGCACCGCAATCAAATCCTTCACAGACTGCATGAACAGCCTGTTTTTACTGAGCAAAAGAGAGGCATTTATGAAGGGAATAGGTACTGGGATGTTTCAGACTGTTACATTCTGCTCCTGGGCACTAATTGTATGGATTGGAGCCATTGTAGTCACAGCCAAGAGAGAAACAGGAGGGAATATGATAGCCGCAGTCATAAGCATTCTCTTTGGATCAATATCTCTTACTTATGCTGCGCCAGACATGCAAGTATTCAATCAGGCAAAAGCTGCCGGGAATGAAGTTTTCCAAGTAATTCAAAGAAAGCCACTCATAAGTTATGCAACAAAAGGCACAGCAGTTGCCAAGATCTATGGCAACATCACAATACATGACGTTCACTTTTCCTACCCTTCCCGGCCAGGAACAACGATCCTTCAAGGGTTATCTTTAACCATTCCAGCTGGAAAGACTGTGGCTTTGGTGGGCAGCAGTGGATGTGGAAAGAGCACAGTCATTTCCCTTGTTGCGAGATTTTATGATCCCGCAGAAGGAAAGATTTTCATTGATGACCACAACATCAAAGATCTTGATTTGAAGTTTCTCAGGAAAAACATTGGGGTAGTTTCTCAAGAACCATCACTATTTTCGGGGAGCATTAAGGATAACCTGAAAGTTGGAAACTTGAATGCAGATGATGCGCAGATACAGAACGCAACTGTTATGGCAAATGCACACTCCTTCATATCACAACTTCCAAATCAGTATCTAACCGAGGTTGGAGAAAGGGGCGTGCAGTTATCAGGAGGACAAAAGCAGAGAATAGCTATAGCTAGAGCTCTTCTTAAAAATCCTCCTATACTTCTGCTTGACGAGGCCACTAGCGCCCTAGATACAGAGTCAGAGAAGCTGGTTCAAGATGCACTTGAGGAAGCTATGGAGGGGAGGACAGTCGTTTTAATTGCACACAGATTGTCAACGGTTGTGAATGCAGATATAATAGCAATCTTCGAGAATGGACGAGTGGTAGATACAGGCACGCACAACAGCTTACTCGAAAAAAGCCAATTTTACAATAGCCTATATAGTATGCAAAACCTTAACGCAGTGCCCTCATCCAGAACTACACATCCCTCCGAAGAATCAACAAACCGACAAGATTCTTCTCAAGAAATCAAACAGAAGAAGGAACAGGAATGCGAAGAGCCTCAAGAAAATCTCACCAACTCTGTCAAGCAAGACATGCAGCAAACGAAAAGCACAAGTATATTCTTTAGAATCTGGTTTGGCTTGACAGAGAAAGAGCTGGTTAAGATTGCTATTGGCTCCTTTGCAGCAGCTTTAGCTGGAATCTCAAAGCCTATTTTCGGGTTCTACATAATTACAATAGGCGTAGCATACTATGATCCAGATGCAAAGCATATAGTTGGAATTTACTCACTTATTTTCTCTGCAATAGGATTGCTTTCATTGTTCAGCCACACCTTGCAACACTTCTTCTTTGGCGTGATTGGAGAGAAGGCAATGACAAACTTCAGACTTGCTCTTTATTCAGGTATTATATCGTTAAACTAG 2259 0.4236 MQTEKGKEEDKKNKDGAETLPFYKLLSYADGIDWFLMALGTLGSIVHGMALPVGYLLLGKALSAYGNNINDTDAMVRALKKEDMHYVYNSCSMFAEIGCWMHASERQLARLRLSYIKAVLSQEVGAFDTDLTSGKIMNGMTNNMSIIQDAIGEKLGHFMSSFATFAAAVVIATLCAWEVALLILVILPLILLVGATYTKNMTTVSAAKMIYQSEATSKIEQTISQIKTVYAFVGESTAIKSFTDCMNSLFLLSKREAFMKGIGTGMFQTVTFCSWALIVWIGAIVVTAKRETGGNMIAAVISILFGSISLTYAAPDMQVFNQAKAAGNEVFQVIQRKPLISYATKGTAVAKIYGNITIHDVHFSYPSRPGTTILQGLSLTIPAGKTVALVGSSGCGKSTVISLVARFYDPAEGKIFIDDHNIKDLDLKFLRKNIGVVSQEPSLFSGSIKDNLKVGNLNADDAQIQNATVMANAHSFISQLPNQYLTEVGERGVQLSGGQKQRIAIARALLKNPPILLLDEATSALDTESEKLVQDALEEAMEGRTVVLIAHRLSTVVNADIIAIFENGRVVDTGTHNSLLEKSQFYNSLYSMQNLNAVPSSRTTHPSEESTNRQDSSQEIKQKKEQECEEPQENLTNSVKQDMQQTKSTSIFFRIWFGLTEKELVKIAIGSFAAALAGISKPIFGFYIITIGVAYYDPDAKHIVGIYSLIFSAIGLLSLFSHTLQHFFFGVIGEKAMTNFRLALYSGIISLN* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00835 752 ProSitePatterns ABC transporters family signature. 495 509 IPR017871 GO:0005524|GO:0016887
Pte8g00835 752 SMART AAA_5 383 575 IPR003593 GO:0016887
Pte8g00835 752 SUPERFAMILY ABC transporter transmembrane region 24 338 IPR036640 GO:0005524|GO:0016020
Pte8g00835 752 CDD ABC_MTABC3_MDL1_MDL2 356 593 - -
Pte8g00835 752 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 356 592 IPR003439 GO:0005524
Pte8g00835 752 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 593 IPR027417 -
Pte8g00835 752 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 86 322 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte8g00835 752 PANTHER ABC TRANSPORTER B FAMILY 4 723 IPR039421 -
Pte8g00835 752 MobiDBLite consensus disorder prediction 598 641 - -
Pte8g00835 752 Pfam ABC transporter 374 523 IPR003439 GO:0005524
Pte8g00835 752 CDD ABC_6TM_Pgp_ABCB1_D1_like 37 330 - -
Pte8g00835 752 FunFam ABC transporter B family member 4 346 601 - -
Pte8g00835 752 Gene3D ABC transporter type 1, transmembrane domain 24 750 IPR036640 GO:0005524|GO:0016020
Pte8g00835 752 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 667 752 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte8g00835 752 Gene3D - 346 594 IPR027417 -
Pte8g00835 752 MobiDBLite consensus disorder prediction 608 631 - -
Pte8g00835 752 Pfam ABC transporter transmembrane region 38 307 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte8g00835 752 SUPERFAMILY ABC transporter transmembrane region 664 751 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00835 Pte-Chr8 31848637 31852173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00835 8 749 Calmodulin-binding Proteins AT2G36910 36.999 2.06e-169 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00835 K05658 - qsa:O6P43_014878 1020.76