Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00834 ATGGCACCTTTATACGGAGACATTATATACCGACTTCGGTGGAGGTCTCTACCAAAAGCAGCTGGTCTTCTCAGGTGTGGCAAAAGTTGCAGACTTCGCTGGATCAACTATCTCAGACCTGACCACAAACGTGGCAATTTCACAGAAGAAGAAGATGAGCTCATTATCAAACTCCACAGTCTCCTCGGAAACAAAAGGGAATTGCCTGGGAGAACAGATAACGAGATAAAGAATTACTGGAATACCCATATAAGAAGGAAGCTTCTGAATAGAGGAATAGACCCTGCAACGCACAGGCTGTTTCTCAGAGTCAAGAAGCTGCTAGCACAATATCTTTCACTGCTTCTACATCTATACCTAAACAAGAAGTCAGTCACGTCCGTGAGTTTAGCGGGTCTGCTAAGGATGATTCAAATAAAGGCAGTGAAAGAACAATGCCCTGGCTTGAACCTTGAGCTCAGAATCAGCCCTCCCCATCCAAACCAGCTTAATCAGCCTTTGAAGACTGGAGGGAGAAACTGTTGCTTTCCTTGCAGTTTGGGATTGCAGAACAGTAAGGACTGCAGCTGTGGATTGGGTCATGATGTGGGTGATAGCAGTGGCAGTGGCAGTGGCAGTATAGGTTATGATTTCTTGAGCGAGGCAGTTGTTTATCCATTGCAGCTCCGTCTCTGCAAGTACTCGGTAGACGCTTGTGAAGGCTGGTTGAAGACAACGAAATTAGTGGTGATTGGAGACCCAGTTGAGCGACAGAGGTGA 759 0.4638 MAPLYGDIIYRLRWRSLPKAAGLLRCGKSCRLRWINYLRPDHKRGNFTEEEDELIIKLHSLLGNKRELPGRTDNEIKNYWNTHIRRKLLNRGIDPATHRLFLRVKKLLAQYLSLLLHLYLNKKSVTSVSLAGLLRMIQIKAVKEQCPGLNLELRISPPHPNQLNQPLKTGGRNCCFPCSLGLQNSKDCSCGLGHDVGDSSGSGSGSIGYDFLSEAVVYPLQLRLCKYSVDACEGWLKTTKLVVIGDPVERQR* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00834 252 SUPERFAMILY Homeodomain-like 25 91 IPR009057 -
Pte8g00834 252 ProSiteProfiles Myb-like domain profile. 39 84 IPR001005 -
Pte8g00834 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 88 IPR017930 -
Pte8g00834 252 CDD SANT 46 84 IPR001005 -
Pte8g00834 252 Gene3D - 5 42 - -
Pte8g00834 252 ProSiteProfiles Myb-like domain profile. 1 38 IPR001005 -
Pte8g00834 252 SMART sant 43 86 IPR001005 -
Pte8g00834 252 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 13 101 - -
Pte8g00834 252 Pfam Myb-like DNA-binding domain 44 83 IPR001005 -
Pte8g00834 252 Gene3D - 43 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00834 Pte-Chr8 31826887 31830514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00834 14 215 MYB Transcription Factor Family AT4G38620 52.609 1.37e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte8g00834 Myb_DNA-binding 8.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00834 K09422 - jre:108993394 243.817