Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00833 ATGGAGAAACTAAAAGCTGCAGTGCCAGATGCCCTCAAAAAAATGGTGGGACAGAGCAACCCAGATGATCTTCCTGAATCTTGCTCTTCTCTGCTGGATTTCTTTCTACGTTTTGATCCATTTCAGCAAATTGTGGCTGACTTGGCAGATGTATCAAGAGGTCTCTGTGGTAAGAATAAGGAGGCTGCTTTGCACTTCAAGCAGACTGGAAATCAATGTTTCTCCAATGGAGACTACACGAAGGCTTTAGATTGCTATACCCAGGCACTAAAAGTTTCCCCTTTTGAAGCTGAGGACATGAAGAAAAATCTGGTTGCCACTTTATATATCAACCGAGCTATAGTATTGCAGAAAATGAATCTTTCAAGAGAATGTTTACGGGATTGCACTCGGGCTCTTCAGATATCTCCTACCTATGGGAAGGCATGGTATAGAAGAGGGAAGACAAATGCATCTCTAGGAAACCATGAAGATGCGATTTGTGATTTACGCTTGGCAAAGATATATGAATCATCGATTAGTGGAAAAAAACAAGTAGAAGCTGAGCTTGAAATAATATCAGACCAGCGAAGTAGGGCAAGTCCGGTCATACAGCCTGATGAGATTGAATTGCCTGCATTAGATGAACCTTTACTTGCTAAACTACAATGTGTCACAGCACCAGATAAAGGAAGGGGTATGGTTTCAACAAGTGACTTTCAACCAGCATCCTTAGTTCACAAAGAAGAACCTTATGCTATGATATTGTTAAAGCAATTACGTGACAGTCATTGCCATTATTGCTTGAATGATCTACCTGAAGATAAAGTTCCATGTAAATCATGTTCCATATCCTTATACTGCTCGCAAAAATGCCAAATTCGAGCTGGAGGAAATACACTCAAGCCAAATTCAGAAGATAACAAAATCCTTCATGATCTACCCTCTGATCTTAAGAAGCATTTTTCAGAAATTACTCTCACAAAGGATTCTGAAGTAGAGATGGAGCATGTTCCGGAACATAAACATGAATGTCAAGGTGTAAATTGGCCTGCTGTTTTGCCATCTGAGTTAGTTTTAGCTGGTCGGGTAATTGCTAGGTCAATAGCCGATAAACAACTCTCCACTGATAAGATTAGCCTCCTCCGACCACTGGAGCTTTCTCACTGTTATCTGCAAGTGCCTTCTGAAAGCAAATTGGAGCTACATATATACTCCATTGTGATACTACACTGTCTTCGACATTCATTTGGATTTGAGCTTCCACTACACAGAAGTCTTATATCACAGATTGTTATACTCATTTCCCAAATCAGGGTCAATTGCATGACTGTTACTCGGATACGGTCCATTGATGCTCATGGTATACTGGATCGGTTTGAAAATCTTGAACCCAGTGGAAATGCTGTAACAAGTAGTGTGGAACAGGTCAGAGTAGGTAAAGCTATTTATAGAGGTGGTAGTTTGTTCAACCACTCTTGCCAGCCAAACATCCATGCATATTTTCTCTCACGTACTCTTTACATAAGGACAACTCAGTTCATTTCAGTTGGATCTCCATTAGAATTATCCTATGGTCCACAGGTTGGACAGTGGGACTGTAAAGACCGCCTTAAGTTTCTGAAGGATGAATACTTCTTCCACTGTCAGTGCAGTGGCTGCTCAGAAGCAAATTTATCTGACCTTGTCTTAAATGCTTTTCACTGCATTAATCCAAATTGTTCTGGCATAGTATTGGAAAGCAGTGTAGCTAATTATGAAAAGCAAAAAATCAAAGACCTCCACAACCATTCCATAATCAACTGCTTGGATTCACTAATTCAGACAGTTGATTATAGCAATGGTGCTCACAGTAAAAAGGATCTTCATGCATTCAATGGAAGTGATCGTCTCCATCTTCTCCAACATGGATACTGTCTGCAATGCGGTTCATACTGCGATATAGCATCTTCTCGTGCTGCTGTGGATAAAGCTTGTCTGGGAATCAAAATGTGCGTGCATCTAAACTACAACTTGGCTAATACACACCCCGTACATGCGTCAGAATTGCAAGATGCGGGTTCAAAAGAAGTGTCAGACATGGAAATTTCAAATGCCATGAGATTTCTGAGTGTGCTGAAATCAAACTTGCACCCATACAACAAGAGTATTGCAGAAGCAGAGGACAGCATTGCCCAGGCCCTTTGTTCACGGGGACAGCTAGAACAGGCAATGGTCCACTGTAAGGCCTCCATAGAGATCTTGAAAAAGCTCTTTGCTCCTGATGACATTGTCATAGCATATGAACTTGTGAAGCTTGCTTCGATTCAGCTTTCCTTGGGTGACAAGGCTGTCGTGAACAACTTGAGTCAGATGTTGGATATTTTCTCACGTTATTATGGTCCTCATGCAGACATAGTATTTCCATATCTTCAGTCTCTTAGAAGACATAGTATTTCCATATCTTCAGTCTCTTAG 2436 0.4097 MEKLKAAVPDALKKMVGQSNPDDLPESCSSLLDFFLRFDPFQQIVADLADVSRGLCGKNKEAALHFKQTGNQCFSNGDYTKALDCYTQALKVSPFEAEDMKKNLVATLYINRAIVLQKMNLSRECLRDCTRALQISPTYGKAWYRRGKTNASLGNHEDAICDLRLAKIYESSISGKKQVEAELEIISDQRSRASPVIQPDEIELPALDEPLLAKLQCVTAPDKGRGMVSTSDFQPASLVHKEEPYAMILLKQLRDSHCHYCLNDLPEDKVPCKSCSISLYCSQKCQIRAGGNTLKPNSEDNKILHDLPSDLKKHFSEITLTKDSEVEMEHVPEHKHECQGVNWPAVLPSELVLAGRVIARSIADKQLSTDKISLLRPLELSHCYLQVPSESKLELHIYSIVILHCLRHSFGFELPLHRSLISQIVILISQIRVNCMTVTRIRSIDAHGILDRFENLEPSGNAVTSSVEQVRVGKAIYRGGSLFNHSCQPNIHAYFLSRTLYIRTTQFISVGSPLELSYGPQVGQWDCKDRLKFLKDEYFFHCQCSGCSEANLSDLVLNAFHCINPNCSGIVLESSVANYEKQKIKDLHNHSIINCLDSLIQTVDYSNGAHSKKDLHAFNGSDRLHLLQHGYCLQCGSYCDIASSRAAVDKACLGIKMCVHLNYNLANTHPVHASELQDAGSKEVSDMEISNAMRFLSVLKSNLHPYNKSIAEAEDSIAQALCSRGQLEQAMVHCKASIEILKKLFAPDDIVIAYELVKLASIQLSLGDKAVVNNLSQMLDIFSRYYGPHADIVFPYLQSLRRHSISISSVS* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00833 811 Pfam SET domain 224 519 IPR001214 GO:0005515
Pte8g00833 811 SUPERFAMILY HIT/MYND zinc finger-like 253 288 - -
Pte8g00833 811 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 805 - -
Pte8g00833 811 SUPERFAMILY SET domain 215 545 IPR046341 -
Pte8g00833 811 Gene3D SET domain 427 518 IPR046341 -
Pte8g00833 811 Gene3D Tetratricopeptide repeat domain 527 806 IPR011990 GO:0005515
Pte8g00833 811 Gene3D - 257 288 - -
Pte8g00833 811 Gene3D Tetratricopeptide repeat domain 40 194 IPR011990 GO:0005515
Pte8g00833 811 ProSiteProfiles TPR repeat profile. 63 96 IPR019734 GO:0005515
Pte8g00833 811 Gene3D SET domain 226 256 IPR046341 -
Pte8g00833 811 SMART tpr_5 140 173 IPR019734 GO:0005515
Pte8g00833 811 SMART tpr_5 106 139 IPR019734 GO:0005515
Pte8g00833 811 SMART tpr_5 711 744 IPR019734 GO:0005515
Pte8g00833 811 SMART tpr_5 63 96 IPR019734 GO:0005515
Pte8g00833 811 ProSiteProfiles SET domain profile. 213 519 IPR001214 GO:0005515
Pte8g00833 811 Coils Coil 710 730 - -
Pte8g00833 811 SUPERFAMILY TPR-like 63 742 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00833 Pte-Chr8 31817560 31826438 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte8g00833 SET 1.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00833 K24634 - qsa:O6P43_020061 973