Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00816 ATGCGAGCATTGTTGGAAATGTCAGCTATTTTCAGCTTATTTTTCCTTCTTGTTGTAGTACCGGTACTCGGGACATCGCTGAACCCACCTTTAAACGATGATGTGTTGGGATTGATTGTATTTAAGGCCGATGTTCGAGATCCAAAAGGAAAGCTGGAGTCTTGGAATGAAGATGCTGATAGTGCTTGTGGTTGGGCCGGTGTGAGATGTAATCCAAGATCCAACAGAGTGACCGAGCTCAACCTTGACGGTTTCTCTCTTTCCGGTAAGATAGGCAGAGGTTTACTGCAGTTGCAATTTCTCAGGAAGCTTTCTCTTTCAAAAAATAATCTTACTGGAAGTATAAGTTCCAATATTGCTCGGATAGATAATCTTAGACTGATTGATTTGAGCGAAAATAATCTTTCCGGGGAGCTACCTGATGTTTTCTTTCGGCAATGTCGATCTTTAAGAGCAATATCTTTGGCGAAAAACATGTTTTCCGGGGGGATTCCAGCTAGTTTAACCTCATGTTCATCTCTTGCTGCAATTGATTTTTCGCATAACCAGTTTTCCGGATCTCTTCCTCCTGGAATTGGGTCCTTAAGTGGACTCAGGTTATTGGATTTATCTAATAATTTGTTCAAAGGTGATGTTCCAAATGGAATTGAAGAGTTAAAGAACTTGAGAGCAATCAACTTGGGAAATAATAACTTTTCTGGGGAGGTCCCTCAAGGGATTGGGAGTTGCTTGCTTTTGAGATCCATTGATCTCAGTGGTAATTCTTTCTTTGGCAACCTTCCAGAGAACATTCAGAAGCTCACATTGTGTAGTTATCTTAATGTCCACGGGAACTCATTTTCGGGTGAGCTTTCTGGGTGGATTGGAGAAATGAGGAATCTCGAGACCTTGGACCTTTCAATGAACAAGTTTTCTGGGGAGTTACCGAGTTCATTAGGTACTCTTCAGTTGTTGAGGAACTTGAATATTTCCCGGAATAGTTTTAGTGGAGATCTTCCTGAATCTTTGACTAATTGCTCCAGCCTCTTGACCTTAGATGTCAGTCACAATTCCATGAAAGGTGCCCTACCCTCATGGATTTTCAAGTCTGTATCAAAGACAGGATTGCTTTCAGCAAAAAGATTAGCTGGAATCAGACATTATTCTCTGTCTTCGTCCATGGAGAATGTTATCCAACACCTTCAGGTCCTGGACTTATCCAGTAATAATTTTTCTGGTGAAATCGCCTCTGCTGTTTCAGCTTTAAGCAGTTTACGTCTACTGAATCTGTCAAGGAACTCTCTAACTGGTGCTATTCCAGCAACCATAGGAGAATTGAAATCTCTTGTTGATCTTGATTTAAGTCAGAATCGGCTAAGCAGAGGCATCCCCTCAGAGATCGGAGAAGCAACATCTTTGAAGGAACTGAGATTGGAACATAACTTCCTTGATGGACAAATACCAAATTCAATTTTGAATTGTTCGTCACTATCTGTTTTGATCTTATCTGAAAACAGACTGACTGGCTCAATACCTGCAGGAATTGGCAAACTCACGAGCTTGCGAATTGTGGACCTGTCTTTTAACGAGCTTACTGGACCTTTACCCAAGCAACTAGCCAATCTTCTTAACCTCGATTCCTTTAATATATCTCACAACAACCTTCAGGGGGAGCTGCCTGCTGGTAGCTTTTTTAACACAATCTCTCCTTCCTCCGTCTCTGGTAATCCAATGCTTTGTGGCTCTGCAGTCAATAGGTCATGCCCTGCTGTCCTTCCAAAACCTATAGTCCTAAATCCAAATTCATCTTCTGATCCCAGTCAAGGTGTACTGCCTCAAACTTTTGGTCATAAAAGAATCATTCTCAGCATTTCTTCGCTAATCGCCATTGGTGCAGCTTCTGTAATTTTCATTGGTGTGATTGCCATCACAGTTCTTAATCTTCACTTTCGAACTACTACATCTAGATCTGCTGCTGCCCTCACAATGTCTGTTGGAGATGACTATAGCCAATCTGCTACTACAGACGCCAACTCTGGTAAGCTTGTCATGTTTTCTGGAGAGCCTGATTTCAGCACTGGAGCACATGCATTGCTCAATAAGGATTGTGAGCTTGGACGCGGTGGATTTGGAGCTGTATACAGAACAGTTCTTCGAGATGGTCGCTCGGTCGCAATCAAGAAGCTTACTGTATCAAGTCTTGTGAAGTCCCAGGGAGATTTTGAAAGAGAAGTGAAGAAATTGGGAAAAGTTAGGCACCAAAATCTAGTGGCACTTGAAGGTTATTACTGGACTACATCGCTACAGCTCCTCATATATGAATATGTTCCTGGTGGTAGTTTGTATAAGCATCTTCATGAGGGAGATGCGAAGCTCCTATCATGGAATGACCGGTTCAACATAATTCTTGGAACGGCAAAAAGCTTGGCATACTTGCACCAATCGAACATCATCCATTACAACATAAAATCTAGCAATGTCCTAATTGATAGCTCTGGGGAAGCTAAAGTTGGAGACTTTGGTTTAGCTAGGCTATTGCCAATGCTTGACCGATATGTTTTGAGCAGCAAAATACAAAGTGCACTTGGCTACATGGCACCAGAATTTGCATGCAGGACAGTTAAGATAACAGATAAATGTGACATTTATGGCTTTGGAGTTTTGATCTTGGAAGTTGTTACTGGAAAGAGGCCCGTGGAATACATGGAAGATGATGTGGTGGTGCTTTGCGATATGGTCCGTGGAGCACTAGAAGAAGGCAGAGTGGAGGCATGTATTGATGGAAGGCTTCAGGGTAGTTTCCCACCTGAAGAAGCCATTCCATTGATGAAGTTAGGTTTAATTTGTACGTCACAAGTGCCATCAAATCGGCCAGACATGGCTGAGGTAGTCAACATATTGGAGCTGATAAGATGCCCTTCTGAAGGCCAAGAGGAATCAGGATGA 2925 0.4232 MRALLEMSAIFSLFFLLVVVPVLGTSLNPPLNDDVLGLIVFKADVRDPKGKLESWNEDADSACGWAGVRCNPRSNRVTELNLDGFSLSGKIGRGLLQLQFLRKLSLSKNNLTGSISSNIARIDNLRLIDLSENNLSGELPDVFFRQCRSLRAISLAKNMFSGGIPASLTSCSSLAAIDFSHNQFSGSLPPGIGSLSGLRLLDLSNNLFKGDVPNGIEELKNLRAINLGNNNFSGEVPQGIGSCLLLRSIDLSGNSFFGNLPENIQKLTLCSYLNVHGNSFSGELSGWIGEMRNLETLDLSMNKFSGELPSSLGTLQLLRNLNISRNSFSGDLPESLTNCSSLLTLDVSHNSMKGALPSWIFKSVSKTGLLSAKRLAGIRHYSLSSSMENVIQHLQVLDLSSNNFSGEIASAVSALSSLRLLNLSRNSLTGAIPATIGELKSLVDLDLSQNRLSRGIPSEIGEATSLKELRLEHNFLDGQIPNSILNCSSLSVLILSENRLTGSIPAGIGKLTSLRIVDLSFNELTGPLPKQLANLLNLDSFNISHNNLQGELPAGSFFNTISPSSVSGNPMLCGSAVNRSCPAVLPKPIVLNPNSSSDPSQGVLPQTFGHKRIILSISSLIAIGAASVIFIGVIAITVLNLHFRTTTSRSAAALTMSVGDDYSQSATTDANSGKLVMFSGEPDFSTGAHALLNKDCELGRGGFGAVYRTVLRDGRSVAIKKLTVSSLVKSQGDFEREVKKLGKVRHQNLVALEGYYWTTSLQLLIYEYVPGGSLYKHLHEGDAKLLSWNDRFNIILGTAKSLAYLHQSNIIHYNIKSSNVLIDSSGEAKVGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDIYGFGVLILEVVTGKRPVEYMEDDVVVLCDMVRGALEEGRVEACIDGRLQGSFPPEEAIPLMKLGLICTSQVPSNRPDMAEVVNILELIRCPSEGQEESG* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00816 974 Pfam Protein tyrosine and serine/threonine kinase 694 959 IPR001245 GO:0004672|GO:0006468
Pte8g00816 974 CDD STKc_IRAK 698 963 - -
Pte8g00816 974 Gene3D Ribonuclease Inhibitor 260 380 IPR032675 -
Pte8g00816 974 Gene3D Ribonuclease Inhibitor 32 188 IPR032675 -
Pte8g00816 974 FunFam Inactive leucine-rich repeat receptor-like protein kinase 191 286 - -
Pte8g00816 974 SMART LRR_typ_2 511 534 IPR003591 -
Pte8g00816 974 SMART LRR_typ_2 291 315 IPR003591 -
Pte8g00816 974 SMART LRR_typ_2 219 243 IPR003591 -
Pte8g00816 974 SMART LRR_typ_2 122 146 IPR003591 -
Pte8g00816 974 SMART LRR_typ_2 195 218 IPR003591 -
Pte8g00816 974 SMART LRR_typ_2 415 438 IPR003591 -
Pte8g00816 974 SMART LRR_typ_2 464 487 IPR003591 -
Pte8g00816 974 SMART LRR_typ_2 535 559 IPR003591 -
Pte8g00816 974 SMART LRR_typ_2 439 463 IPR003591 -
Pte8g00816 974 ProSitePatterns Protein kinases ATP-binding region signature. 698 721 IPR017441 GO:0005524
Pte8g00816 974 Gene3D Transferase(Phosphotransferase) domain 1 769 972 - -
Pte8g00816 974 Pfam Leucine rich repeat 393 452 IPR001611 GO:0005515
Pte8g00816 974 Pfam Leucine rich repeat 465 524 IPR001611 GO:0005515
Pte8g00816 974 Pfam Leucine Rich Repeat 246 267 IPR001611 GO:0005515
Pte8g00816 974 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 29 960 - -
Pte8g00816 974 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 769 969 - -
Pte8g00816 974 ProSiteProfiles Protein kinase domain profile. 692 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00816 974 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 311 585 - -
Pte8g00816 974 Gene3D Phosphorylase Kinase; domain 1 684 768 - -
Pte8g00816 974 FunFam Leucine-rich repeat receptor-like protein kinase 31 190 - -
Pte8g00816 974 SUPERFAMILY RNI-like 277 560 - -
Pte8g00816 974 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 686 768 - -
Pte8g00816 974 Gene3D Ribonuclease Inhibitor 381 584 IPR032675 -
Pte8g00816 974 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Pte8g00816 974 SUPERFAMILY L domain-like 50 363 - -
Pte8g00816 974 Gene3D Ribonuclease Inhibitor 189 259 IPR032675 -
Pte8g00816 974 SUPERFAMILY Protein kinase-like (PK-like) 695 964 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00816 Pte-Chr8 31583031 31586575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00816 10 974 Receptor kinase-like Gene Family AT3G56370 67.732 0.0 1243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Pte8g00816 PK_Tyr_Ser-Thr 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00816 - - qsa:O6P43_014848 1406.73