Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00805 ATGACCTTCAAGCGCAGGAACGGAGGACGTAACAAGCACGGCCGTGGACATGTCAACTTCATTCGCTGCTCTAACTGCGGCAAATGCTGTCCCAAGGACAAGGCAATCAAGAGGTTCCTTGTGAGAAACATTGTGGAGCAGGCTGCAGTGAGAGATGTTCAAGAAGCATGTGTCTATGAGCAGTACACACTTCCAAAGCTGTATGTGAAGATGCAGTACTGTGTCTCTTGTGCCATTCACTCTCATGTTGTGAGGGTTCGATCTAGCACTGACAGGAGGAACCGTGCCCCACCACAGCGTTTTGCTAGGCGCAGGGTAAGTGGCTTGTACATTTTTCATGTCTGTGCAATTTGA 354 0.4944 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSSTDRRNRAPPQRFARRRVSGLYIFHVCAI* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00805 117 Pfam Ribosomal protein S26e 1 104 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pte8g00805 117 Gene3D Ribosomal protein S26e 1 108 IPR038551 -
Pte8g00805 117 FunFam 40S ribosomal protein S26 1 109 - -
Pte8g00805 117 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pte8g00805 117 PANTHER 40S RIBOSOMAL PROTEIN S26 1 105 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00805 Pte-Chr8 31490703 31492509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00805 1 105 Cytoplasmic Ribosomal Protein Gene Family AT2G40510 86.667 1.88e-63 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00805 K02976 - gmx:100784958 208.764