Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00804 ATGAATACTTGTTTTCGCTTTGGTAGCCGAGTAGTGACATTAGGCTCCCGATTACCCAGTATCACGTTCGGATACCACAACCCGAACCCGAATTTGTACCAAATCAGTAACACCCACACTGCAACGTTTCCATTTGCTAGCTGCAAAATCCAATCTTCTCCGTCGTCGTCGTCGACCCATTTCCCTCGTTGCCGAATGGACTCTTCAGCTGCTTCTTCTACTCTCTCCAATGGAGCTTATGACGGAGTGGTTCGCTTCCCCTTGTCTCCTTCATCCGCTTTGGTCATTCAGAAGGGAGATATCACCAAGTGGTCGGTAGATGGCACCACCGACGCGATAGTTAATCCAGCGAATGAGAGGATGCTTGGTGGGGGTGGTGCTGATGGAGCCATACATAGAGCAGCAGGGCCGGATTTATTACAAGCATGCTATCAAGTCCCAGAGGTCAGACCTGGAGTCCGCTGTCCCACTGGAGAAGCAAGGATTACTCCAGGTTTCCGACTGCCGGCATCTCATGTTATCCACACTGTTGGACCGATCTATAATGTTGATCCTAACCCTGCGGCTTCACTGAGAAGTGCTTACAGCAATAGCTTGAAGGTTGCCAAAGAGAACAATATTCAGTATATGGCATTCCCGGCCATATCCTGTGGTGTTTATGGGTATCCTTATGACGAAGCTGCCACTGTGGCTATCTCCGCCATTAGGGAATCCCCTAACGACTTTAAGGAGGTGCATTTTGTTCTGTTCTCATCTGATATTTACGGTGTTTGGTTGGAAAAGGCAAATGATTTGCTCAAAAACTAG 807 0.4833 MNTCFRFGSRVVTLGSRLPSITFGYHNPNPNLYQISNTHTATFPFASCKIQSSPSSSSTHFPRCRMDSSAASSTLSNGAYDGVVRFPLSPSSALVIQKGDITKWSVDGTTDAIVNPANERMLGGGGADGAIHRAAGPDLLQACYQVPEVRPGVRCPTGEARITPGFRLPASHVIHTVGPIYNVDPNPAASLRSAYSNSLKVAKENNIQYMAFPAISCGVYGYPYDEAATVAISAIRESPNDFKEVHFVLFSSDIYGVWLEKANDLLKN* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00804 268 CDD Macro_OAADPr_deacetylase 94 263 - -
Pte8g00804 268 SMART YBR022w_8 93 231 IPR002589 -
Pte8g00804 268 Pfam Macro domain 114 231 IPR002589 -
Pte8g00804 268 ProSiteProfiles Macro domain profile. 81 266 IPR002589 -
Pte8g00804 268 SUPERFAMILY Macro domain-like 93 264 IPR043472 -
Pte8g00804 268 Gene3D Leucine Aminopeptidase, subunit E, domain 1 37 262 IPR043472 -
Pte8g00804 268 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 51 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00804 Pte-Chr8 31461503 31463482 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00804 99 244 C2H2 Transcription Factor Family AT5G01310 32.099 1.56e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00804 K23518 - qsa:O6P43_020114 360.533