Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00800 ATGTCCAGAGAAAGGGAACGATTTGATGAGATAGGCAAGAAGATTAAGAGGGAAGGAGATGCGTCTTTCCAAATGGGAAGAAGACACATGTTGGGGCCTCCAGGAACCCTAAATACCATCACACCATGTGCAGCCTGTAAGCTCTTGCGACGAAGATGTGCTCAAGAATGCCCCTTTTCTCCATACTTTTCACCTCATGAACCACATAAGTTTGCTTCTGTCCACAAAGTCTTTGGTGCTAGCAATGTCTCAAAGATGCTGATGGAGGTACCTGAGTGTCAAAGAGCTGATGCTGCTAATAGTCTTGTATATGAGGCAAATGTGAGGCTAAGAGATCCAGTGTATGGATGCATGGGTGCAATTTCAGCTTTGCAACAACAGGTTCAATCTTTACAGGCTGAACTTAATGCAGTGAGAGCAGAAATACTTAGATACAAACTTACGGAAGCGAATATGCAAATACCCTCCCCTCATGCTGTTTTGCTCTCTTGTTCTAGTGTTGTTTCTATTACTGCCCCCACACCGGAACTGATACCGCCAACTCCTCCTGCACCTCCTCTTCCTCCATCTTCTTCATCTACTTTGTATACACAACAAACTGTTGCCACCGATTATAGCACAATTTCAAGTGAAGACAATATCTCCTACTTTGGTTAA 657 0.4384 MSRERERFDEIGKKIKREGDASFQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPECQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRAEILRYKLTEANMQIPSPHAVLLSCSSVVSITAPTPELIPPTPPAPPLPPSSSSTLYTQQTVATDYSTISSEDNISYFG* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00800 218 Pfam Lateral organ boundaries (LOB) domain 42 139 IPR004883 -
Pte8g00800 218 MobiDBLite consensus disorder prediction 175 196 - -
Pte8g00800 218 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Pte8g00800 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 38 176 - -
Pte8g00800 218 MobiDBLite consensus disorder prediction 175 190 - -
Pte8g00800 218 Coils Coil 121 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00800 Pte-Chr8 31411659 31413555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00800 1 150 AS2 family AT2G30340 69.375 7.49e-75 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte8g00800 LOB 2.8e-40 No_clan