Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00797 ATGAAAGCTCAAATCATAATGGCAGCCAAAGAAGAAGAAAAGAGAGATCTAAATGAATGGACAATTAAAGGCATTGATGATCTTCTCCTTCATCTACCTTCTCACCTCTGTGCAACCAGCTGCTATTATCCTTTCAGAGACGGAAGGAAGATGGATTGCTCTATCTGTACTACAATGCCATACATGCTAAGGCCTCCCAGGAATACTGTCTGTGCAACTTGTTATGAAGGAGCTAGGAACATAATAAGTCTGGTAAATAAGCTCCAGAATCAACAGGATGAAGTTCAGAAAACGAATAGCTTGTTATCAGTTGCTCCCAATTCCTGTAAGAGTCTGATGGATGTTTCAAGATGGGTCTTAGGAATGATAAACAAAGTAAAGGGACGAACGGAAGAAGCCAACTTTCTTGGAGAAATGGTCTCAGCTTTCAGAGAACAAATTCACACTGATATACTCGTCAATCCTGGTAATGACGGGCCGTCCATACCTGCACATAAGGCCATACTGGCAGTGAGATCAGAAATATTTAAGAATATGCTTGAATGTGATGAATGGAAAGCTGCTCCAAGCAGCAGCATAACATTAGCAGAGTTGAACCATGAAGAGCTGCAGTGTCTACTGGAGTTTCTTTACAATGGACGAGTAACTAAGGAAAGACTAGACAAGCATGTGTGTGCAATGTTGCATGCAGCAGACAAGTACGAAATTCCATATTTGCAGAAACACTGTGAAAGCCATATGCTGGATTCTTTGAATGTCTCTAACGCCCTTGACGTATTAGAGGCCTCAGATGTCTGTTCTTCAAATCAAGAATTGAAGGACACCACGTTAAATTTTATTGTAAAGAACATGGAGGATATTGTTTTCTCAAGTAAGTATGATGAGTTTGCTCTCAAGAGTCCCCATTTGAGTGTACAAATTACAAGAGCGGCATTGAAGACCATAAGAAAACACTGA 957 0.4044 MKAQIIMAAKEEEKRDLNEWTIKGIDDLLLHLPSHLCATSCYYPFRDGRKMDCSICTTMPYMLRPPRNTVCATCYEGARNIISLVNKLQNQQDEVQKTNSLLSVAPNSCKSLMDVSRWVLGMINKVKGRTEEANFLGEMVSAFREQIHTDILVNPGNDGPSIPAHKAILAVRSEIFKNMLECDEWKAAPSSSITLAELNHEELQCLLEFLYNGRVTKERLDKHVCAMLHAADKYEIPYLQKHCESHMLDSLNVSNALDVLEASDVCSSNQELKDTTLNFIVKNMEDIVFSSKYDEFALKSPHLSVQITRAALKTIRKH* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00797 318 SMART BTB_4 149 251 IPR000210 GO:0005515
Pte8g00797 318 ProSiteProfiles BTB domain profile. 149 219 IPR000210 GO:0005515
Pte8g00797 318 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 70 316 IPR044784 -
Pte8g00797 318 SUPERFAMILY POZ domain 134 249 IPR011333 -
Pte8g00797 318 CDD BTB_POZ_ZBTB_KLHL-like 158 234 - -
Pte8g00797 318 Pfam BTB/POZ domain 144 249 IPR000210 GO:0005515
Pte8g00797 318 Gene3D - 253 318 - -
Pte8g00797 318 Gene3D Potassium Channel Kv1.1; Chain A 123 252 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00797 Pte-Chr8 31385393 31387954 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pte8g00797 BTB 2.4e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00797 K10523 - qsa:O6P43_014812 318.161