Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00796 ATGGTTTCTAGGGAGCACAAGAAAGCAGTACTGCATGAGAAGCTGCAACTTCTTCGTTCCATTTCGAACTCTCATGCTCTAAGCAAAACGTCGATCATCGTTGATGCATCGAAGTACATCAGAGAGCTCAAGCAAAGAGTAGAAAGACTGAACCAGGACATAGCAACAGCACAATCTTCAAACGATCAACAAGATAATTCCCATATGAAACAGGTCACGGTGGAAACCCTAGAAAAGGGATTTCTCATAAACGTCTTCTCAGAAAATAGTTGCCCGGGTCTGCTTGTCTCCATATTGGAGGCCCTTGAAGAGATGGGCTTGAATGTGGTGGAAGCTAGGATTTCTTGTGATGACACCTTTTGTTTTCAAGCAGTTGGAGGAGACTATAATGAAGAAGAGAATGAAACTATTGATGCCAGTGCAGTGAAGCAAGGGGTGGCCGAGGCTATAAAGAACTGGAGTGAAAGCACTGATCAACAGTAA 483 0.4369 MVSREHKKAVLHEKLQLLRSISNSHALSKTSIIVDASKYIRELKQRVERLNQDIATAQSSNDQQDNSHMKQVTVETLEKGFLINVFSENSCPGLLVSILEALEEMGLNVVEARISCDDTFCFQAVGGDYNEEENETIDASAVKQGVAEAIKNWSESTDQQ* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00796 160 Coils Coil 33 67 - -
Pte8g00796 160 Gene3D - 5 74 IPR036638 GO:0046983
Pte8g00796 160 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00796 Pte-Chr8 31382570 31385320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00796 11 146 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 30.201 4.28e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00796 - - tcc:18600910 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00932 16 28791037 28798772 Pte8g00796 8 31382570 31385320 RCT
Pte4g01253 4 43423142 43424922 Pte8g00796 8 31382570 31385320 RCT
Pte8g00796 8 31382570 31385320 Pte8g00796 8 31382570 31385320 RCT