Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00788 ATGGCCAACTTGATTGGTTGCTGCTATGAAGGGGATGACAGTTTACTGGTGGCGGAGTTTATGTCCCATGAAACTCTAGCAAAACATCTTGTTCACTGGGAAGCACAACCAATGAAATGGGCAATGAGACTGAGGGTGGCCTTGCACTTGGCACAAGCACTCGAGTATTGCAGCAGTAAAGACGGGGCTTTGTATCACGATCTCAATGCTTATAGGATTTTGTTCGATCAAGTAGGATTGTGA 243 0.4568 MANLIGCCYEGDDSLLVAEFMSHETLAKHLVHWEAQPMKWAMRLRVALHLAQALEYCSSKDGALYHDLNAYRILFDQVGL* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00788 80 Pfam Protein tyrosine and serine/threonine kinase 3 76 IPR001245 GO:0004672|GO:0006468
Pte8g00788 80 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 78 IPR045845 GO:0004672|GO:0009742
Pte8g00788 80 ProSiteProfiles Protein kinase domain profile. 1 80 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00788 80 Gene3D Transferase(Phosphotransferase) domain 1 1 79 - -
Pte8g00788 80 SUPERFAMILY Protein kinase-like (PK-like) 3 77 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00788 Pte-Chr8 31259806 31260162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00788 1 76 Glycoside Hydrolase AT3G07070 42.500 1.62e-13 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pte8g00788 PK_Tyr_Ser-Thr 6.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00788 - - csin:114320551 145.206