Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00778 ATGGGGGCTTATGTTCAAGGGTCTAATACGCAATCTTTTCAACAAAATACTACGAGAAAGAGGAAAACAAGGAGTAGAAAAGATGGGTCTAAATCTGTAGCTGAAACTTTAGCAGAGTGGAAAGCATATAATGACCGTATTGAGGCTTGTACTGATGAGAGTAAACCAACTCGTAAAGCGCCAGCCAAGGGTTCTAAGAAAGGGTGTATGAAAGGGAAAGGAGGACCTGAGAATTCACGTTGTAATTACAGAGGTGTTAGGCAAAGGACGTGGGGTAAGTGGGTTGCTGAAATAAGAGAGCCAGATAGGGGAAAGAGGCTGTGGTTAGGTACTTTCCCTAATGCAATTGAAGCTGCTCGTGCTTATGATGAAGCTGCACGAGCTATGTATGGTAGTGCTGCCCGTCTCAACTTTCCTAATGTCAAAGATTGTAACTCGTATAGGCAAGCTATGAGTGACACCTCTGCTTCTGCAACTTTCTCAAGTTCTTCATTGGCTACTTCGACTGGTTCTGTTTCAACGAGTGTATCGGAGGCTGGTGCTGATGATGTGAAGGTGCAGGCTTTGAACACTGATGAAAGTTGTATAGATGGAGGAACTGGAGTCTATAGGTCCTTACCTGAACCAGTAGAAGCTTACACACCTATTAGTGCTGTGAAAGAAGAGCCTATTGATGGTGAAGAGCAAAAACCAAAAAGTGGTCACAACTCAAAGGTGGAGGAAAACCATGTCGTTGGACTGACAAATGATGGTCAGCATTGGGGTGCCTCGAATTTTGTGTGGGACTTCGATGATGCTGATATCTTCCGAAATTTCTCTGATGAAGAGATGTTTGATGTTCGTGATCTTCTTGGTAGCATTGAGAACGATCCACTTGATCCTCTTTTAGGTTCGTCTGTTGACAATTATCTGCAAAGTGAATTTCCCTCTGACTTGTCATATGAGATGCAAAACCCAGATGCCAAATTGTTGGGTAGTTTGCAACACATGGAGCAGGTCCCATCAAATGTCGATTATAGTTTCGATTTCCTCAAACCAGTGATGACCGATGACAATTGTAACAAGGGAGACGAGCAACGCCATCTTGATTTTGGTTTGTCTGATATTGATTTTGGAAACCACGGTTTGAACTCTGAAAATAAACCTCTACCGCCAGAGTAA 1161 0.4307 MGAYVQGSNTQSFQQNTTRKRKTRSRKDGSKSVAETLAEWKAYNDRIEACTDESKPTRKAPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPDRGKRLWLGTFPNAIEAARAYDEAARAMYGSAARLNFPNVKDCNSYRQAMSDTSASATFSSSSLATSTGSVSTSVSEAGADDVKVQALNTDESCIDGGTGVYRSLPEPVEAYTPISAVKEEPIDGEEQKPKSGHNSKVEENHVVGLTNDGQHWGASNFVWDFDDADIFRNFSDEEMFDVRDLLGSIENDPLDPLLGSSVDNYLQSEFPSDLSYEMQNPDAKLLGSLQHMEQVPSNVDYSFDFLKPVMTDDNCNKGDEQRHLDFGLSDIDFGNHGLNSENKPLPPE* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00778 386 SUPERFAMILY DNA-binding domain 82 139 IPR016177 GO:0003677
Pte8g00778 386 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Pte8g00778 386 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Pte8g00778 386 CDD AP2 81 141 IPR001471 GO:0003700|GO:0006355
Pte8g00778 386 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 19 347 - -
Pte8g00778 386 MobiDBLite consensus disorder prediction 1 34 - -
Pte8g00778 386 MobiDBLite consensus disorder prediction 50 81 - -
Pte8g00778 386 MobiDBLite consensus disorder prediction 214 238 - -
Pte8g00778 386 FunFam Ethylene-responsive transcription factor 2 81 140 - -
Pte8g00778 386 ProSiteProfiles AP2/ERF domain profile. 82 139 IPR001471 GO:0003700|GO:0006355
Pte8g00778 386 SMART rav1_2 82 145 IPR001471 GO:0003700|GO:0006355
Pte8g00778 386 MobiDBLite consensus disorder prediction 221 238 - -
Pte8g00778 386 MobiDBLite consensus disorder prediction 1 18 - -
Pte8g00778 386 Pfam AP2 domain 81 131 IPR001471 GO:0003700|GO:0006355
Pte8g00778 386 Gene3D AP2/ERF domain 82 141 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00778 Pte-Chr8 31098631 31101936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00778 5 372 AP2-EREBP Transcription Factor Family AT2G40340 38.338 3.33e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte8g00778 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00778 - K09286 pcin:129294142 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00778 8 31098631 31101936 Pte8g00778 8 31098631 31101936 RCT