LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte8g00769	ATGCCGAACCTCGAATGTCGTATGTACGAGACCAGGTACCCAGAGGTGGACATGGCTGTGATGATACAGGTCAAGAACATCGCCGATATGGGCGCCTATGTTTCACTTCTCGAGTACAACAACATCGAGGGTATGATATTGTTCTCTGAGCTCTCCCGCCGTCGGATTCGTAGTGTCAGCAGTCTCATCAAAGTCGGACGCATTGAGCCTGTCATGGTGCTCAGGGTCGACAAGGAGAAAGGTTATATCGATTTGAGTAAGAGGAGGGTTTCCGAGGAAGACATTCAGGCTTGTGAAGAGAGGTTTAATAAGAGTAAGCTTGTTCACTCAATTATGAGACATGTTGCTGAGACTCTGGACATTGATTTGGAGGAATTATATATTCACATTGGGTGGCCACTATATCGAAAATATGGCCATGCTTTTGAGGCATTCAAGATAATTGTGACTGATCCAGATTCAGTTCTAAGTTCGCTCACTCGTGAAATCAAAGAAGTTGGTCCTGATGGGCAGGAGGTGACAAAAGTAGTTCCAGCAGTGACTGAAGAAGTAAAAGATGCTCTCATAAAAAACATAAGTAGAAGGATGACTCCTCAACCACTGAAGATTAGGGCTGACGTTGAGATGAAATGCTTCCAGTTTGATGGTGTTCTTCACATTAAGGAGGCAATGCGAAAGGCTGAAGCTGCAGGGAATAATGACTGCCCTGTGAAAATCAAACTCGTTGCTCCTCCTCTTTATGTTCTGACAACTTCAACTTTAGACAAGGAGCAAGGAATATTGACTCTTAAAAAGGCAATTAAAGCTTGTAGTGAAGCAATTGAGCAGCACAAGGGGAAACTGACTGTTAAGGAGGAACCTAGAGCTGTGAGTGAACGTGATGATAAATTGCTTACTGATTACATGCTTAAACTACGCCAAGATAATGAAGAGGTTAGTGGCGACGAAGACAGTGAAGAGGAGGAAGATACCGGCATGGGAGAAGTTGATGTAGAGAATTCTGGAGCTGGGATCATCGACTAG	1023	0.4409	MPNLECRMYETRYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERFNKSKLVHSIMRHVAETLDIDLEELYIHIGWPLYRKYGHAFEAFKIIVTDPDSVLSSLTREIKEVGPDGQEVTKVVPAVTEEVKDALIKNISRRMTPQPLKIRADVEMKCFQFDGVLHIKEAMRKAEAAGNNDCPVKIKLVAPPLYVLTTSTLDKEQGILTLKKAIKACSEAIEQHKGKLTVKEEPRAVSERDDKLLTDYMLKLRQDNEEVSGDEDSEEEEDTGMGEVDVENSGAGIID*	341

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte8g00769	340	Gene3D	Translation initiation factor 2; subunit 1; domain 2	91	195	IPR024054	-
	Pte8g00769	340	Pfam	Eukaryotic translation initiation factor 2 alpha subunit	126	256	IPR011488	GO:0003723\|GO:0003743
	Pte8g00769	340	Pfam	S1 RNA binding domain	14	88	IPR003029	GO:0003676
	Pte8g00769	340	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1	1	329	IPR011488	GO:0003723\|GO:0003743
	Pte8g00769	340	FunFam	Eukaryotic translation initiation factor 2 subunit alpha	91	195	-	-
	Pte8g00769	340	FunFam	Eukaryotic translation initiation factor 2 subunit alpha	3	90	-	-
	Pte8g00769	340	MobiDBLite	consensus disorder prediction	312	328	-	-
	Pte8g00769	340	SUPERFAMILY	eIF-2-alpha, C-terminal domain	199	315	IPR024055	-
	Pte8g00769	340	CDD	S1_IF2_alpha	14	89	IPR044126	GO:0003723
	Pte8g00769	340	MobiDBLite	consensus disorder prediction	306	340	-	-
	Pte8g00769	340	Gene3D	-	2	90	IPR012340	-
	Pte8g00769	340	FunFam	Eukaryotic translation initiation factor 2 subunit 1	201	323	-	-
	Pte8g00769	340	SUPERFAMILY	Nucleic acid-binding proteins	7	88	IPR012340	-
	Pte8g00769	340	SUPERFAMILY	eIF2alpha middle domain-like	90	195	IPR024054	-
	Pte8g00769	340	Gene3D	EIF_2_alpha	201	323	IPR024055	-
	Pte8g00769	340	SMART	S1_6	15	88	IPR022967	-
	Pte8g00769	340	ProSiteProfiles	S1 domain profile.	17	88	IPR003029	GO:0003676

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte8g00769	Pte-Chr8	31035838	31041598	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte8g00769	2	341	Eukaryotic Initiation Factors Gene Family	AT5G05470	79.179	0.0	520

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte8g00769	K03237		-	cit:102615936	588.571