Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00768 ATGAAGAAGAACTGGAAGAGGTTAAGGGTTCGTTTTCCGTTTCTGAGTTTGTTAGTTTTATGGTTGGTGTCTCATAGTCTCGGTTTGAGTTGGTCGTTGAACGATGAAGGTAGGGCTCTCTTGACGCTGAGGCAGAGTATCGAGAGTGACCCTTTTGGTGCTTTGTCCAATTGGATTGACGGTGAACTTGAGGTTAACCCATGTTCTTGGTCGGGAGTTGAGTGCTCTGAGGGAAAAGTTGTTGCCTTGAACCTGAAAGATCTGTGTCTTCGAGGAACATTACCACCAGAGCTTGCAAATCTTACCCAAATAAAGTCTATTATTTTGCGGAACAACTCCTTCTTTGGAACTATCCCAGAAGGAATAGGGATGTTGTCAGAGTTAGAATTTCTAGATTTGGGATATAATAACTTCAGAGGACCATTACCAGTCGATTTTGGCAATAACTTGTCACTGGCAATACTTCTGTTAGATAACAATTATCTGCTTGGAGGTGTGTCTCCTGAGATTCATGAATTGGCGGCAGTTTCTGAATGTCAAGTAGATGAAAGCATATTGTCTATGGCTGCTAAAGTACAATCTTGCAACACAAGACCCCTTTCAGGGAATATTGATCAAGATATGAAAGGAGCAGGTCAAAGGAAACTGCAGCAGGTTCGGCGATCCCCTTGGAATCGTGAAACCCAGCCTCTACCGGAAGAAACACCAGATACTAAACCATCACCACCAAATGATCCTATTGTTTCAGATGCTCCCACATTTCCTCCTACAGAATCATCTCCTTCGCCCTTCCCTACTGGAAACGCAACACCAACTAATGACCCAAGATCTGCTCAACCAGTTAAGAAAACTTCTTCAAAGCATTGGGCTGCATTAGGTGGAGGTATAGGTGGTGCACTATTTTTGGTAATAATCATTGGTGTGTATCTCTTTAAAACCAATAAGGTAGCTACCGTCAAACCTTGGGCTACAGGATTAAGTGGACAACTGCAGAAGGCATTTGTAACTGGTGTGCCAAAGCTAAAGAGATCTGAGCTTGAAGCAGCTTGTGAAGATTTCAGCAATGTCATTGGTACTTCACCAATTGGGACAGTATACAAAGGAACTTTATCTACTGGGGTTGAAATAGCCGTGGCCTCCATGACAGTGACTTCTAATAAAGATTGGTCAAAGAACTTGGAAACACAATTTAGGAAGAAGGTAGAAATGTTATCAAAGGTGAACCACAAAAATTTCATCAATCTTCTTGGATATTGTGAAGAAGAGGAACCTTTCACTAGAGTGGTGGTCTTTGAATATGCCCCAAATGGAACACTCTTTGAGCACTTACACATAAAAGAATCCGAGCACTTGGATTGGTTAACAAGAATGAGAATAGCCATGGGAATGGCATATTGCCTGCAACATTTGCACCAGCTAAATCACCCTGTCATCCACAGCAATTTAAATTCTTCAGCTGTCTATCTTACTGAGGATTATGCAGCCAAAGTCTCAGAGTTGAGTTTCTGGAACGAGATAACAAGAATGAGGAAACGCTCAAATGCACCGTCAGGAGGTCCTGAAAGCAATGTCTATAGCTTTGGTGTGATCTTGTTTGAAATGGTAACAGGTCAACTGCCTTACTCAGCAGATGATAGCTCACTTGA 1646 0.4216 MKKNWKRLRVRFPFLSLLVLWLVSHSLGLSWSLNDEGRALLTLRQSIESDPFGALSNWIDGELEVNPCSWSGVECSEGKVVALNLKDLCLRGTLPPELANLTQIKSIILRNNSFFGTIPEGIGMLSELEFLDLGYNNFRGPLPVDFGNNLSLAILLLDNNYLLGGVSPEIHELAAVSECQVDESILSMAAKVQSCNTRPLSGNIDQDMKGAGQRKLQQVRRSPWNRETQPLPEETPDTKPSPPNDPIVSDAPTFPPTESSPSPFPTGNATPTNDPRSAQPVKKTSSKHWAALGGGIGGALFLVIIIGVYLFKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSPIGTVYKGTLSTGVEIAVASMTVTSNKDWSKNLETQFRKKVEMLSKVNHKNFINLLGYCEEEEPFTRVVVFEYAPNGTLFEHLHIKESEHLDWLTRMRIAMGMAYCLQHLHQLNHPVIHSNLNSSAVYLTEDYAAKVSELSFWNEITRMRKRSNAPSGGPESNVYSFGVILFEMVTGQLPYSADDSSL 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00768 548 MobiDBLite consensus disorder prediction 235 262 - -
Pte8g00768 548 Pfam Protein tyrosine and serine/threonine kinase 354 542 IPR001245 GO:0004672|GO:0006468
Pte8g00768 548 Gene3D Phosphorylase Kinase; domain 1 323 433 - -
Pte8g00768 548 Gene3D Transferase(Phosphotransferase) domain 1 434 547 - -
Pte8g00768 548 FunFam Nuclear pore complex protein NUP107 33 191 - -
Pte8g00768 548 MobiDBLite consensus disorder prediction 201 284 - -
Pte8g00768 548 PANTHER PROTEIN MALE DISCOVERER 2 15 546 - -
Pte8g00768 548 SUPERFAMILY Protein kinase-like (PK-like) 334 545 IPR011009 -
Pte8g00768 548 ProSiteProfiles Protein kinase domain profile. 351 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g00768 548 FunFam Inactive receptor-like serine/threonine-protein kinase 325 433 - -
Pte8g00768 548 Pfam Leucine rich repeat N-terminal domain 34 76 IPR013210 -
Pte8g00768 548 MobiDBLite consensus disorder prediction 263 284 - -
Pte8g00768 548 Gene3D Ribonuclease Inhibitor 32 222 IPR032675 -
Pte8g00768 548 SUPERFAMILY L domain-like 34 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00768 Pte-Chr8 31024662 31028204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00768 12 542 Receptor kinase-like Gene Family AT5G05160 27.521 2.26e-40 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pte8g00768 PK_Tyr_Ser-Thr 6.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00768 - - qsa:O6P43_013817 656.366