Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00756 ATGATCCAAACATTTTCAGATTCTCTGTATTCAGAAGTGAACCCTCAACCAGACATGGCGTTTGTACCCGGTGGAAAAGGAAAACTGGTTTTGTTCTTACTTTTCTGGATTGTCGTTCTATGCGCCACAGTGGTATACCTTCAGCTAAATTTGTCAGAGGAGGGAAAAGGCACATCCAACCAGGAGTTAATTACAACTGGTCTACCTAAGGTAGTGAAAGAGAATTTGGAGCAAGTGACTCACAAAGTCTACTTTGATATAGAAATTGATGGCAGACTTTCAGGTCGCATAGTCATAGGCCTCTTTGGGAAAACAGTTCCAAAAACTGTAGAAAACTTTCGAGCCCTTTGTACAGGGGAGAAAGGAATGGGAAAAAGTGGAAAGGCTCTCCACTACAGAGGAAGCACTTTTCATAGGATTATACCTGGTTTTATGGTCCAAGGTGGCGATTTCACTCGAGGTGATGGACGAGGTGGTGAATCTATATATGGTATGAAGTTTGCTGATGAAAACTTCCACCTGAAGCACACAAGGGCAGGATATCTGAGTATGGCTAATGCTGGTCCAGATACCAATGGATCTCAATTTTTCATCACCACTGTCAAAACTAGCTGGTTGGACGGTCACCATGTTGTCTTTGGTAAGGTGCTCTCTGGTATGGATATATTGTTTAAAATTGAAGCTGAAGGGACCGAAAGCGGTGCTCCAAGAAGCAAGGTCGTGGAAGACATATGCGATGGACATATGGGTGTGTGTGCGATTGTTCATGGGGAAGATTGA 780 0.4333 MIQTFSDSLYSEVNPQPDMAFVPGGKGKLVLFLLFWIVVLCATVVYLQLNLSEEGKGTSNQELITTGLPKVVKENLEQVTHKVYFDIEIDGRLSGRIVIGLFGKTVPKTVENFRALCTGEKGMGKSGKALHYRGSTFHRIIPGFMVQGGDFTRGDGRGGESIYGMKFADENFHLKHTRAGYLSMANAGPDTNGSQFFITTVKTSWLDGHHVVFGKVLSGMDILFKIEAEGTESGAPRSKVVEDICDGHMGVCAIVHGED* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00756 259 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 132 149 IPR020892 GO:0003755|GO:0006457
Pte8g00756 259 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 149 IPR002130 GO:0000413|GO:0003755
Pte8g00756 259 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 101 116 IPR002130 GO:0000413|GO:0003755
Pte8g00756 259 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 195 207 IPR002130 GO:0000413|GO:0003755
Pte8g00756 259 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 208 223 IPR002130 GO:0000413|GO:0003755
Pte8g00756 259 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 180 195 IPR002130 GO:0000413|GO:0003755
Pte8g00756 259 SUPERFAMILY Cyclophilin-like 77 241 IPR029000 -
Pte8g00756 259 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 84 239 IPR002130 GO:0000413|GO:0003755
Pte8g00756 259 CDD cyclophilin_ABH_like 81 241 - -
Pte8g00756 259 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 84 247 IPR002130 GO:0000413|GO:0003755
Pte8g00756 259 FunFam Peptidyl-prolyl cis-trans isomerase 76 249 - -
Pte8g00756 259 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 82 242 - -
Pte8g00756 259 Gene3D - 70 248 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00756 Pte-Chr8 30900017 30905270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00756 43 227 U-box Gene Family AT5G67530 37.173 1.39e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00756 K01802 - qsa:O6P43_013862 317.775