LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte8g00752	ATGACGAAACTACCCTTCTCCTCCTACTCCTGTGACTTTGTGAACGTTACCTTTGTTTCGATTATATTCTTGTTCTCTTCAATTCCTTCGTCGTGTTCTATCGGCTCAGGCAACACCCTGGCCATCAGTTATGGCTCTGCCACTGTTTGTGGCGTTGTAGCAAATCAGCCAACACAACGCATACAATGTTACCGGGGTGGTGAAATTATCCCCGCTGATCCTAACATTTCGTACTCATCCATTTCCGGTGGCCGGAACTTCTTTTGCGGACTCAGGTCTGGTGGCTCCAGTTTTCAATGCTGGAACAGTACCTTTTCCAACTCCAGCTTTCAAACCAAAAGGCTATACAATAATGTTACTGTTCGATTGGAGAATCTCTCTGTTGGAGAGGATCATATATGTGCTACGGTAGTCGGTACCGGCACTGTTCAGTGCTGGAGGGTTAATGATAGCTTTAGTTTGCCATCTGGATCTAATCAGTTTGTTTCAATCTCATCTGGTTCGGGCTTTTCTTGCGGTATTTTGAAGAATAGCTCTCTCGTCAAGTGTTGGGGTTATAACACTTCCATCGCGAATCACATACAGAACGAGCTCGGTGAAATGCCTATGTTGACTCTTACAGCTGGATATTCACATGTTTGCGGGTTAAATACAACTGGATTTTTGGTATGTAAAGGTAGCAACAGTTCTGGCCAACTAGATGTGCCCGCAGGAGGGGCTATGGAATACACGGGGCTGTCACTTGGAGCAGAGCATAGCTGTGCAATAAGAAGGTCCAATAACTCGGTGGTTTGCTGGGGTGGTGGAGGTCAATACTCTACGAATGCTCCTGCCAGAGTTTCATTTGAATTAATGGCTTCAGGGTTGAATTTCATTTGTGGGTTGTTGACTGGTAATTTTTCTGTACTTTGCTGGGGTCCGGGGTGGCCTAATAATCTCAATCCTTCAAATCCAAGACTTGAGCTTCCCTTAAGTCCAGTTCTTCCAGGTCCTTGTGTACAATCTTCTTGTAGTGAGTGCGGTCTGTATCCTGCATCTCAAGAATTATGTTCTGGTTCTGGCAATATTTGCAAGCCTTGTTTGCCTCAGATATCGGTGAACTCAGTACCACCAGGCCAACCACAGTCTCCACCATCAAGTTCTCCACCATCATCAACTTCTAGACCTTTAAGGAGGGGTTTATTGGCATTTGTTATTGTTGGCTCAGTTGGATCATTGGCTGGTCTATGCACAATGATATATTGCTTTTGGGCTGGAGTTTGTTTTGGCAAAAAGAAAGTCCATAACTCAGTACAACCTACGATCACAAGAGGGTCTAGTTCAAGTAGTGGTGGTTCAAATGGTGGTCGTATTTCAAACAGCAGTCCTCCTTCAGGATCATCCACTATAAGACGCCAAGGTTCGAGAATAATGCGCCTAGGTTCGAGAATAATGGGACGCCAGAGGAGCGGAACATCATCAAAGCATGCAGAAAGGGCAGAAGAATTTTCACTGGCTGAGCTTGCTGCAGCCACCAATAATTTCAACCTTGAGAACAAGCTTGGTGCAGGAAGCTTTGGTGTTGTGTACAAAGGCAAACTCTACGATGGCCGCGAAGTGGCAATCAAAAGAGGTGAGCTGAAAACAAAGAAACTTCAAGAGAAAGAAAGTGCTTTTGAGTCAGAATTGACGTTTTTGTCACGTCTTCACCACAAACACTTGGTCAGTTTAGTTGGTTTCTGTGAAGAAAAAGATGAAAGGCTTTTGGTGTACGAATACATGAAGAATGGAGCTCTGTACGATCATTTACATGACAAGAACAATGTGGACAAGACTAGTAACATTTTGAATTCGTGGAAAGTAAGGATCAAAATTGCATTAGATGCTTCAAGAGGAATTGAGTACCTCCATAATTATGCTGTGCCACCTATAATTCACAGAGATATCAAGTCATCCAATATTCTGCTAGATGTACATTGGGTAGCAAGAGTATCTGATTTTGGACTGTCATTAATGAGTCCAGAACCTGATCATGATTACAAGAATATGAAAGCTGCTGGCACCGTTGGGTACATTGATCCTGAGTACTATGGTCTTAATGTCTTGACGGCAAAGAGTGATGTTTATGGACTTGGAATAGTACTTTTAGAACTTCTGACAGGGAGAAAAGCTATTTTCAAGAGTGATGACAATGGAGGAAATCCCATTAGTTTGGTGGAGTTTGCAGTGCCAGCAATTAGTTCTGGGGAACTGCAGAAAATCCTAGATCCAAGAGTAGGTCCTCCAGAGTTGAATGAAGCAGAGGCAGTGGAGCTTGTGGCTTATACAGCCATGCATTGTGTGAATTTGGAGGGGAAGGACAGACCAACCATGACTGACATTGTCGCCAATTTGGAAAGAGCGCTTGCTCTTTGCGATGAAAGTCAAGGGAGCATCTCAAGTGGTACAATTTCCATTGTTACAGAATGA	2448	0.4371	MTKLPFSSYSCDFVNVTFVSIIFLFSSIPSSCSIGSGNTLAISYGSATVCGVVANQPTQRIQCYRGGEIIPADPNISYSSISGGRNFFCGLRSGGSSFQCWNSTFSNSSFQTKRLYNNVTVRLENLSVGEDHICATVVGTGTVQCWRVNDSFSLPSGSNQFVSISSGSGFSCGILKNSSLVKCWGYNTSIANHIQNELGEMPMLTLTAGYSHVCGLNTTGFLVCKGSNSSGQLDVPAGGAMEYTGLSLGAEHSCAIRRSNNSVVCWGGGGQYSTNAPARVSFELMASGLNFICGLLTGNFSVLCWGPGWPNNLNPSNPRLELPLSPVLPGPCVQSSCSECGLYPASQELCSGSGNICKPCLPQISVNSVPPGQPQSPPSSSPPSSTSRPLRRGLLAFVIVGSVGSLAGLCTMIYCFWAGVCFGKKKVHNSVQPTITRGSSSSSGGSNGGRISNSSPPSGSSTIRRQGSRIMRLGSRIMGRQRSGTSSKHAERAEEFSLAELAAATNNFNLENKLGAGSFGVVYKGKLYDGREVAIKRGELKTKKLQEKESAFESELTFLSRLHHKHLVSLVGFCEEKDERLLVYEYMKNGALYDHLHDKNNVDKTSNILNSWKVRIKIALDASRGIEYLHNYAVPPIIHRDIKSSNILLDVHWVARVSDFGLSLMSPEPDHDYKNMKAAGTVGYIDPEYYGLNVLTAKSDVYGLGIVLLELLTGRKAIFKSDDNGGNPISLVEFAVPAISSGELQKILDPRVGPPELNEAEAVELVAYTAMHCVNLEGKDRPTMTDIVANLERALALCDESQGSISSGTISIVTE*	816

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte8g00752	815	MobiDBLite	consensus disorder prediction	433	490	-	-
	Pte8g00752	815	PANTHER	SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4	199	801	IPR044815	GO:0004674
	Pte8g00752	815	SUPERFAMILY	RCC1/BLIP-II	24	273	IPR009091	-
	Pte8g00752	815	MobiDBLite	consensus disorder prediction	368	388	-	-
	Pte8g00752	815	MobiDBLite	consensus disorder prediction	433	468	-	-
	Pte8g00752	815	SMART	serkin_6	508	795	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte8g00752	815	SUPERFAMILY	Protein kinase-like (PK-like)	490	791	IPR011009	-
	Pte8g00752	815	FunFam	serine/threonine-protein kinase-like protein CCR1	478	586	-	-
	Pte8g00752	815	ProSitePatterns	Protein kinases ATP-binding region signature.	514	536	IPR017441	GO:0005524
	Pte8g00752	815	Pfam	Protein kinase domain	509	788	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte8g00752	815	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	637	649	IPR008271	GO:0004672\|GO:0006468
	Pte8g00752	815	Gene3D	Transferase(Phosphotransferase) domain 1	587	806	-	-
	Pte8g00752	815	ProSiteProfiles	Protein kinase domain profile.	508	795	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte8g00752	815	FunFam	Serine/threonine-protein kinase-like protein CCR4	587	808	-	-
	Pte8g00752	815	Gene3D	Phosphorylase Kinase; domain 1	472	586	-	-
	Pte8g00752	815	CDD	STKc_IRAK	514	793	-	-
	Pte8g00752	815	Gene3D	-	25	198	IPR009091	-
	Pte8g00752	815	Gene3D	-	199	341	IPR009091	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte8g00752	Pte-Chr8	30862599	30865457	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte8g00752	14	816	Receptor kinase-like Gene Family	AT3G55950	59.398	0.0	855

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CR4L	Pte8g00752		Pkinase	1.6e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte8g00752	-		-	qsa:O6P43_013857	1071.61