LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte8g00749	ATGGCTTCGATGTCTTCAAGCCCTCGCACTGTCGAAGAGATCTTCAAGGACTATAGCGCAAGACGCAATGCCATCGTTCGAGCTCTCACACATGATGTCGATGACTTTTATGCTCTTTGTGATCCGGAAAAGGAGAATCTATGCTTATACGGACACCCGAATGAGTCATGGGAGGTGACTTTACCCGCAGAAGAAGTTCCGCCTGAACTTCCTGAACCTGCTTTAGGTATCAATTTTGCAAGAGATGGGATGAAGCGTATAGATTGGCTCTCTTTGGTTGCTGTGCACAGCGACTGCTGGTTGGTTTCTGTAGCATTCTACTTCGGTGCTAGGCTCAATAGGAATGACAGGAAGCGACTGTTCAGCCTCATAAATGATCTGCCTACCGTATTTGAAGTTGTCACAGGACGGAAGCCTGTAAAAGAGAAGCCAACTATAGACAGTGGAAGCAAATCTAAAAATAGCTCAAAGAGATCAAGTGAAGGTCAAATAAAAACCAACTCGAAGTTGCTCGATGAAAGTAATGGGGAGGATGAAGATGAGCACAGTGAAACCCTTTGTGGAATTTGCGGTGGAAGTTACACATCATCAGACGAGTTTTGGATTGGCTGTGACATATGTGAGAGATGGTTCCATGGGAAATGCGTGAAGATCACACCAGCCAAGGCAGAAAGCATAAAGCAGTATAAGTGCCCCTCTTGTAGCAACAAAAAGGGAAGGCAGTAA	726	0.4532	MASMSSSPRTVEEIFKDYSARRNAIVRALTHDVDDFYALCDPEKENLCLYGHPNESWEVTLPAEEVPPELPEPALGINFARDGMKRIDWLSLVAVHSDCWLVSVAFYFGARLNRNDRKRLFSLINDLPTVFEVVTGRKPVKEKPTIDSGSKSKNSSKRSSEGQIKTNSKLLDESNGEDEDEHSETLCGICGGSYTSSDEFWIGCDICERWFHGKCVKITPAKAESIKQYKCPSCSNKKGRQ*	242

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pte8g00749	241	Pfam	Alfin	10	136	IPR021998	GO:0006355\|GO:0042393
Pte8g00749	241	SMART	PHD_3	186	235	IPR001965	-
Pte8g00749	241	Pfam	PHD-finger	187	237	IPR019787	-
Pte8g00749	241	MobiDBLite	consensus disorder prediction	141	180	-	-
Pte8g00749	241	ProSitePatterns	Zinc finger PHD-type signature.	187	234	IPR019786	-
Pte8g00749	241	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	176	236	IPR013083	-
Pte8g00749	241	CDD	PHD_AL_plant	186	237	IPR044104	-
Pte8g00749	241	FunFam	PHD finger alfin-like protein	179	236	-	-
Pte8g00749	241	SUPERFAMILY	FYVE/PHD zinc finger	176	239	IPR011011	-
Pte8g00749	241	PANTHER	CPG BINDING PROTEIN	7	241	IPR045104	GO:0006355\|GO:0042393

Showing 1 to 10 of 12 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte8g00749	Pte-Chr8	30821381	30824891	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte8g00749	1	242	Alfin-like Transcription Factor Family	AT5G05610	76.955	1.61e-124	351

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	Alfin-like	Pte8g00749		Alfin	6.5e-68	No_clan

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte8g00749	K26274		-	jre:109007164	435.647

Showing 1 to 1 of 1 entries