Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00742 ATGTGCAGTACAGCAGCTGATGCTCTTGCTTTTGCTGCAGTGCCAATGTTGCCATTACATCCTCAAGGTCTATCCTCCACTTCTCTTAGGTTTTTTGAGTTTCCTTCATGGCCATTTTCAACTGATGTGGACGAAAGAACTGCAAATGGTTCGAAAAGCCATATCCTAGCAGAGAAACGACGTAGGGACAGAATTAATGGACATCTGGCAACTCTAAGAAAACTGATCCCCAAATCTGACAATATGAACAAGGCAGCTGTACTAGGAAGTGTGATAGAACGAAAGAAACAGCTAAAGCGAAAGGCAATTGATATTAGTAAAGCATACACTGTTCCAATTGAGTTGGATGAAGTAAAGATTGACGAATCATACAGCAAAAGATGA 384 0.4089 MCSTAADALAFAAVPMLPLHPQGLSSTSLRFFEFPSWPFSTDVDERTANGSKSHILAEKRRRDRINGHLATLRKLIPKSDNMNKAAVLGSVIERKKQLKRKAIDISKAYTVPIELDEVKIDESYSKR* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00742 127 Gene3D - 43 106 IPR036638 GO:0046983
Pte8g00742 127 SMART finulus 55 104 IPR011598 GO:0046983
Pte8g00742 127 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 51 100 IPR036638 GO:0046983
Pte8g00742 127 Pfam Helix-loop-helix DNA-binding domain 52 94 IPR011598 GO:0046983
Pte8g00742 127 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 49 98 IPR011598 GO:0046983
Pte8g00742 127 PANTHER TRANSCRIPTION FACTOR BHLH30 41 123 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00742 Pte-Chr8 30747036 30747642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00742 45 120 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 53.947 1.67e-20 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte8g00742 HLH 6.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00742 - - gmx:100799687 127.487