Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00741 ATGATGTCAAATCAAGACAGTCAATCGTTCCATGGGCCGTACGCGGAGCTAGAAGACCGGAACTTCCAAATCCGAGGACGTACCCTGTACTTCATCATCGTTCTCTTCTCCATCGTCCTTGCAATCATTTTGCTCTTCATCTACGTACGTTGGCTCTGTCGATCCCATGCCCAGTACTTCATCTCCACTTTCAACTCGCTCCGCCCATCTCAGCCTCACCCGCGGTCGGCCCTGCAGCCACAAGGACTGGATCCCATCGCTATTAAGCATTTACCAATGATTTTATACCAAGCGCCGCCGAAGGATTCGGACTTTGGTCATAGGTTGCAGAATGAAACTGAATGTTGCATCTGCCTCGGTGAGTTCAGAGATGGTGAGAAGTTAAAGGTTTTACCTGGGTGTAACCATTGTTTTCACTCTGAATGTGTTGACAAGTGGCTTACTTGTCAATCCAATTGCCCAATTTGTAGAGCTTGTCTTCGATTTGATTCTCTTCCTAGAATTTTGATTGGGGAGCCAGCCGTCATTATCAATGTTCAACAGCAAACACTATAA 555 0.4667 MMSNQDSQSFHGPYAELEDRNFQIRGRTLYFIIVLFSIVLAIILLFIYVRWLCRSHAQYFISTFNSLRPSQPHPRSALQPQGLDPIAIKHLPMILYQAPPKDSDFGHRLQNETECCICLGEFRDGEKLKVLPGCNHCFHSECVDKWLTCQSNCPICRACLRFDSLPRILIGEPAVIINVQQQTL* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00741 184 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Pte8g00741 184 CDD RING-H2_EL5-like 114 157 - -
Pte8g00741 184 SMART ring_2 115 156 IPR001841 -
Pte8g00741 184 Pfam Ring finger domain 114 157 IPR001841 -
Pte8g00741 184 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 161 IPR013083 -
Pte8g00741 184 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 27 159 IPR044675 -
Pte8g00741 184 SUPERFAMILY RING/U-box 89 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00741 Pte-Chr8 30740425 30741568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00741 3 164 C3H Transcription Factor Family AT3G11110 39.506 3.03e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00741 - - gmx:100794927 198.364