Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00737 ATGCCTTTCTTCGACATTGTTTCCAAATGCACTGTCTTCCCCGACCAAAAATCCACACTTGCAGACCTCAAACTCTCCGTCTCCGACCTACCCATGCTTTCCTGTCACTACATCCAAAAGGGTTGTCTCTTCACTCACCCTTCTCTTCCTTTTGACTCTCTCACTCTTCTCCTCAAAGATTCGCTCTCCCGCACACTCTCTCTCTTCCCACCTCTTGCGGGCCGATTGAAAACCGATTCCGATGGCTATGTCTATATCACATGTAACGATGCCGGCGTTGACTTTGTCCAAGCCAGTGCTAATGGCCTGTACGTCAGTGACATTCTTGCTGCCACCTATGTACCCGATTGTGTGAAGCAATTCTTCGTGTTTGATCGGACTGTGAGTTACACCGGCCATTTTCAGCCCATCATGGCCGTACAAGTCACCGAGTTAGCAGATGGGATCTTCATTGGATGTGCGGTGAACCATGCTGTTGTTGATGGTACGTCTTTCTGGAACTTCTTCAACACCTTCGCTGAAGTCTGCAGAGGAGCCACCAAGTTGACGAAGTCAAAGCTATCGGACTTTCGTCGTGAATCGATTTTGATTTCCAAGGCAGTGCTTCAGTTGCCGGAAGGTGGACCCAAGGTGACCTTCAATTTAGATGACCCCATTCGAGAAAGAATCTTCAGTTTCAGTCGTGAAGCCATTCTTAAGCTGAAAGCAAAAGCCAACGGCCAAAAATGGACTCAAGACGATAAGGTCGTTCATGCATTTGAACTCCTTGGGAAACAAAGCAACGACAGGTACAATGGCAGAGTGTCGCCACGCTTCAACAACTGGTTAAAGAGCAACGCTTCGAAACCGAAAAACGACGAAACAGCTGAGGAAATTTCTTCGTTTCAATCTCTTTGCGCGTTATTATGGAGAGCCGCGACACGTGCAAGGAAGTTGTCACCTTCAAAAACGACGACGTTCAGAATGGCGGTGAACTGCCGCCACAGGCTAGAGCCGAAGCTTGACCCGTACTACTTCGGGAACGCAATTCAAAGCATCCCCACTTACGCTTCCGCCGGTGACGTGGTTTCCAATGATCTGCGATGGTGTGCGGAGCAGCTGAACAGAAATGTGAAGGCCCACGGTAGCGATACCGTGAGGCGATTCGTAGAGGATTGGGAGAGCAATCCGAAGTGCTTCCCCTTAGGAAACTTCGACGGTGCATCCATTACGATGGGTAGCTCGCCGAGATTCCCCATGTACGAGAATGATTTCGGATGGGGTAGACCTTTGGCTGTGAGGAGTGGTGGGGCTAACAAGTTCGACGGAAAGATCTCGGCTTTTCCAGGGAGAGAAGGTGGAGGGAGCGTAGATTTGGAAGTGGTTTTGTCTCCGGAAACAATGGCGGGGTTGGAGTCTGATTTGGAGTTCATGCAGTACGTATCAACTTAG 1431 0.4962 MPFFDIVSKCTVFPDQKSTLADLKLSVSDLPMLSCHYIQKGCLFTHPSLPFDSLTLLLKDSLSRTLSLFPPLAGRLKTDSDGYVYITCNDAGVDFVQASANGLYVSDILAATYVPDCVKQFFVFDRTVSYTGHFQPIMAVQVTELADGIFIGCAVNHAVVDGTSFWNFFNTFAEVCRGATKLTKSKLSDFRRESILISKAVLQLPEGGPKVTFNLDDPIRERIFSFSREAILKLKAKANGQKWTQDDKVVHAFELLGKQSNDRYNGRVSPRFNNWLKSNASKPKNDETAEEISSFQSLCALLWRAATRARKLSPSKTTTFRMAVNCRHRLEPKLDPYYFGNAIQSIPTYASAGDVVSNDLRWCAEQLNRNVKAHGSDTVRRFVEDWESNPKCFPLGNFDGASITMGSSPRFPMYENDFGWGRPLAVRSGGANKFDGKISAFPGREGGGSVDLEVVLSPETMAGLESDLEFMQYVST* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00737 476 Gene3D - 4 203 IPR023213 -
Pte8g00737 476 Pfam Transferase family 6 471 - -
Pte8g00737 476 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 472 - -
Pte8g00737 476 Gene3D - 218 471 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00737 Pte-Chr8 30704417 30705930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00737 57 465 Monolignol Biosynthesis Gene Families AT5G48930 26.329 1.20e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00737 - - mesc:110625174 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00663 16 19576237 19577339 Pte8g00737 8 30704417 30705930 RCT
Pte8g00737 8 30704417 30705930 Pte8g00737 8 30704417 30705930 RCT