Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00734 ATGGATAACAGACGATTTCTGATGGGACTTGTGAAGTATGGAAAAGGGGACTGGAGAAATATCTCTCGCAATTTTGTAGTCACCAAGACTCCTACACAAGTGGCTAGCCATGCTCAGAAATACTATATAAGGCAGCAGCACTCAGGAGCTAAAGACAAAAGAAGACCAAGCATCCATGACATTAAAATTACTAATCTCACTGATGATAATTCGCCATCAGAAAACAAGATTCCTGCAGTCCATGCCATGCCCAAGGTTTTACTCAACTGGAATCATCCTGGAAAACTTGTGTTTCTGAATACTAATCAGGGAAGTTTGTATGGTCCATCTTCATGTGATACCAGATCAGATCAACTTAAATTGCAGGAAAAGTTTATGTATGATGATGCTTTTTGGGACTTGCATGAAAATCCAGAACTCACTGTCTGA 429 0.3986 MDNRRFLMGLVKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQQHSGAKDKRRPSIHDIKITNLTDDNSPSENKIPAVHAMPKVLLNWNHPGKLVFLNTNQGSLYGPSSCDTRSDQLKLQEKFMYDDAFWDLHENPELTV* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00734 142 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 2 97 IPR043363 -
Pte8g00734 142 SUPERFAMILY Homeodomain-like 3 46 IPR009057 -
Pte8g00734 142 FunFam transcription factor MYB1R1 1 47 - -
Pte8g00734 142 ProSiteProfiles SANT domain profile. 1 46 IPR017884 -
Pte8g00734 142 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 46 IPR017930 -
Pte8g00734 142 Gene3D - 1 47 - -
Pte8g00734 142 CDD SANT 4 41 IPR001005 -
Pte8g00734 142 NCBIfam myb-like DNA-binding domain, SHAQKYF class 4 45 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00734 Pte-Chr8 30632508 30632936 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte8g00734 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00734 - - qsa:O6P43_013906 150.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00858 16 27719514 27721323 Pte8g00734 8 30632508 30632936 RCT
Pte7g01313 7 37518210 37519582 Pte8g00734 8 30632508 30632936 RCT
Pte4g01183 4 42787754 42792016 Pte8g00734 8 30632508 30632936 RCT
Pte8g00734 8 30632508 30632936 Pte8g00734 8 30632508 30632936 RCT