Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00716 ATGGCGGCGTCCTTCAGTTCGTCGTGCGCTGCTTGCAAGTATCTGAGACGAAAATGCACACAAGAATGCCTAATTGCAAATATACACAGGGTTTTCGGAGCTAGCAACGTCTCAAAGCTTCTTAACGAGCTCAGTGCTATACTGATAGGGACGACGCCGTTAGATCACTGGCTTTTGAAGCTTCGTCTCCAAGATCCTGTGTATGGTTGCATGGGTCACATCTCATTACTTCAACAAAGACTTCGGGATATGCGGAGTATGCTTTTAAGTGCCAAGAAGGAGCTTGCAACGTATATCGGACCCCAAGCTATGTTACCCATTTTGCAACCACCGGATTTCTTTGCACAACAACAACCATCGGGGATGATACCACAACATCAAGGTCCATCGGGGATGATACCACAATATCAAGGTCCATCGGTGATGATACCACAACATCAAGGTCCATCGGGGATTATACCCCAACATCAAGGTCCTTCGCGGATGATACCACAACATCAAGGTCCATCGGGGATGATACCGTAA 525 0.4724 MAASFSSSCAACKYLRRKCTQECLIANIHRVFGASNVSKLLNELSAILIGTTPLDHWLLKLRLQDPVYGCMGHISLLQQRLRDMRSMLLSAKKELATYIGPQAMLPILQPPDFFAQQQPSGMIPQHQGPSGMIPQYQGPSVMIPQHQGPSGIIPQHQGPSRMIPQHQGPSGMIP* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00716 174 Coils Coil 74 94 - -
Pte8g00716 174 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 126 - -
Pte8g00716 174 Pfam Lateral organ boundaries (LOB) domain 8 90 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00716 Pte-Chr8 30446478 30447002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00716 3 110 AS2 family AT5G66870 56.198 3.55e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte8g00716 LOB 1.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00716 - - ghi:107933201 140.584