Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00699 ATGAGTTTTGTTTTCAGAGGAACAAGAGGAGACATAGAAAGTGGATTTCCAGAATTTGTTCCTGAACGGCGCACTTTGCGTGTGCATAGTGCACGTCATGTAAATACAAATTCACTAACCTTTCTTGTCACAGTACTCTTGCTTTTCATGATACTTAATTCACACCAGATGTCACCAAATTTTCTACTTTGGCTAGTGCTTGGCGTCTTTCTGATGGCTACAATGTTGAGAATGTATGCAACCTGTCAACAACTTCAGGCTCAAGCCCAAGCTCATGCAGCTGCTGCCAGTGGTCTTCTTGGTCACACAGAATTGCGGCTACATATGCCACCGTCAATAGCACTTGCAACTCGAGGCCGTCTACAAGGCTTAAGACTTCAGCTTGCTCTTCTTGACAGGGAGTTTGATGACCTAGATTATGAAACCTTGAGAGCCTTGGACTCAGATAATGTACCTCCGGTTCCTTCTATGAGTGAGGAAGAGATCAATGCTCTTCCTGTCCACAAATACAAGGCAGCTGGGCAGCAAAATGGTGGATCGGTACAACAAGCTTCATCTTCAACATCTGCTGAGAAGAAACAAGATTCCTCAAATACTGTCGGGAACCTGAAACCCACAGAAGATGAGTTGACTTGCAGTGTCTGCTTGGAGCAAGTTAATGTGGGAGATTTACTCCGCAGCTTGCCTTGCTTGCATCAGTTTCATGCTAGCTGCATCGATCCTTGGCTGCGTCAGCAAGGGACATGTCCTGTCTGTAAATTCAGGGTAGGGTCTGGATGGAACGAAAGTGGAGAGAATCAAGATCCTTCATTCATGTTATTACAAAGAAAGATGCCGAAAGAACAGCAGAATACCCGAATTTCCCTCTCCGTTGCTCTTATCGCAGATTGCACGTTCACAGAGATACATAATTCTACTGTTATACTTGTTTCCTTCAAACCTCAACTCTTCGATTCTTCAATTCAAAGTACAACTTCAAAGAGGGTGCAATGTCAAGCATATCTCATAGTGATTTTCTCGGAGCCTTACCCAAGCAATCGCCCCTATTCTTTCGAGCACCGATTTGGGCCTTCTCTCTGTTACCCGTGGTCGTTCCACAGCATCGAGCTAGGTCATTTTCGTCTCTTTCTTATTCTTGCTTTGTTTCTTGGTGTTCAAAGCTTCTGTTTGGGCCTTGGCCATGAGTGCCTTGGACCCCTTACACTGGAGCTTGTAGGGATGACGGAGGTTGGGGATGGATTTCTTGGACTGAAGGTGCTAGGTTATGGTACATTTGGTCATGCTATTGCCTCGTGCCCGAATCGAGCCTTTGAGGTTACTATTGGTATAGTTGGGTCTGGTGGCGAAGTTCATGTGCCTAAAATGGATGATGTCAGTCCTTGGATAGTTGTCCAGAAGTCGAATAGATTTCGTGCTGCGACAAGAAAGAATAATAAGAAACTGTCGAGGGGCAGTTTGGTGTGCTTCATAATGAGATGA 1479 0.4503 MSFVFRGTRGDIESGFPEFVPERRTLRVHSARHVNTNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPPVPSMSEEEINALPVHKYKAAGQQNGGSVQQASSSTSAEKKQDSSNTVGNLKPTEDELTCSVCLEQVNVGDLLRSLPCLHQFHASCIDPWLRQQGTCPVCKFRVGSGWNESGENQDPSFMLLQRKMPKEQQNTRISLSVALIADCTFTEIHNSTVILVSFKPQLFDSSIQSTTSKRVQCQAYLIVIFSEPYPSNRPYSFEHRFGPSLCYPWSFHSIELGHFRLFLILALFLGVQSFCLGLGHECLGPLTLELVGMTEVGDGFLGLKVLGYGTFGHAIASCPNRAFEVTIGIVGSGGEVHVPKMDDVSPWIVVQKSNRFRAATRKNNKKLSRGSLVCFIMR* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00699 492 SMART ring_2 212 252 IPR001841 -
Pte8g00699 492 MobiDBLite consensus disorder prediction 175 203 - -
Pte8g00699 492 CDD RING-H2_PA-TM-RING 211 253 - -
Pte8g00699 492 SUPERFAMILY RING/U-box 206 258 - -
Pte8g00699 492 PANTHER TARGET OF ERK KINASE MPK-1 1 258 - -
Pte8g00699 492 Pfam Ring finger domain 211 253 IPR001841 -
Pte8g00699 492 MobiDBLite consensus disorder prediction 174 203 - -
Pte8g00699 492 ProSiteProfiles Zinc finger RING-type profile. 212 253 IPR001841 -
Pte8g00699 492 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 185 258 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00699 Pte-Chr8 30235597 30249438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00699 1 270 C3H Transcription Factor Family AT3G55530 78.676 9.45e-139 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00699 K16283 - cave:132186684 414.461