Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00696 ATGGCAACCATTGCTACTTTGTTCAACAAGTTCATCTTTTTATTCCTTCTTTTCGTTCACCTTGGCTGTTTCTTCATATCCACCACAAAAACCATAACCAGTGACCGCCATAGCCAGAACCCATCTTCTAAAAAACGCAAAATCTCATCTTTCTCTGATCCTTCTCATCCCAAACCAAAAACCCACAAAGCTCTTTGCTCGTCTTGGTCGGTCGTCAAACTATTTTTCACGTCAAAGTCACAAAAAATCATTAATGCTGACTCAGAGAAAACTCAGTCCACAGCTACAGGTACTTCAACATCCGCAAAATCATCTCAGCGGGCTTTAGTCTTGCTGATGCAACCGGAACCGCAATCACCGGAGCCTCATAGAAAACCACCTGGTCCCTGCCCGGAATCTGATCTGTCCTCCGACAACACTTTCCTCCCTCTGCGCAACGATATCTTTCCTTGTACTGCATGTGGTGAGATTTTCCAGACACCCCAGTCGCTTGAACAGCACCAATCTGTTCGACACGCTGTTTCAGAACTCATTGATGGTGATACAGGTAACAACATAGTCAGAATCATATTCAAAACAGGTTGGAACGATAACCCAAAAAATTATAGCATAGTTCGGATCCTGAAGATCCGTAACAGCCCTAAGATACTGTCCCAGTTTGAAGAGTATAGAGAAGCTGTTAAAGCTAAAGCAGCTGTCAAGGGACGAGACGAGAGGTGTATAGCTGATGGGAATGAACTATTGAGGTTTCACTGTTCAACTTTTCTCTGTGATTTAGGACTCAATGGCCAATCTAGCATCTGCAACCAGCAGTACTGTAATATCTGTGGGATTATCAAGTCTGGATTTTCAACCAAGTTGGATGGGATTTCCACATTGTCCAGCAGCTGGAGGGCACACTTGTGTATACCTGAGGAGATCGAGCAAGAATTCAAGTTCATGAATGCGAAAAGGGCCATGCTGGTTTGTCGGGTCATTGCGGGTCGAGTCGGGTGCGATTCGGATGAGGTGGATAAGGAGGATGGTGGGTATGACTCTCTGATATCAAGAAGTATTAGTGAGATTCATACCAGGTTGGAAGAGGAGGACTTACTGGTGTTCAATCCTAGAGCTGTGCTACCTTGTTTTGTGATTGCGTATACTGTGTGA 1149 0.4456 MATIATLFNKFIFLFLLFVHLGCFFISTTKTITSDRHSQNPSSKKRKISSFSDPSHPKPKTHKALCSSWSVVKLFFTSKSQKIINADSEKTQSTATGTSTSAKSSQRALVLLMQPEPQSPEPHRKPPGPCPESDLSSDNTFLPLRNDIFPCTACGEIFQTPQSLEQHQSVRHAVSELIDGDTGNNIVRIIFKTGWNDNPKNYSIVRILKIRNSPKILSQFEEYREAVKAKAAVKGRDERCIADGNELLRFHCSTFLCDLGLNGQSSICNQQYCNICGIIKSGFSTKLDGISTLSSSWRAHLCIPEEIEQEFKFMNAKRAMLVCRVIAGRVGCDSDEVDKEDGGYDSLISRSISEIHTRLEEEDLLVFNPRAVLPCFVIAYTV* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00696 382 SUPERFAMILY ADP-ribosylation 174 381 - -
Pte8g00696 382 ProSitePatterns Zinc finger C2H2 type domain signature. 151 172 IPR013087 -
Pte8g00696 382 Gene3D - 174 381 - -
Pte8g00696 382 ProSiteProfiles Zinc finger C2H2 type domain profile. 149 177 IPR013087 -
Pte8g00696 382 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 67 380 - -
Pte8g00696 382 MobiDBLite consensus disorder prediction 34 62 - -
Pte8g00696 382 MobiDBLite consensus disorder prediction 86 112 - -
Pte8g00696 382 MobiDBLite consensus disorder prediction 34 48 - -
Pte8g00696 382 MobiDBLite consensus disorder prediction 86 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00696 Pte-Chr8 30157193 30158516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00696 69 383 C2H2 Transcription Factor Family AT2G29660 53.939 3.64e-102 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte8g00696 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00696 - - qsa:O6P43_014008 506.138